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University of Cambridge

The organisation of a third-order olfactory brain region in the vinegar fly

Abstract

dc:description.abstract

Neural representations of the chemosensory world generate both learned and instinctive behaviours. Olfactory systems detect a huge range of volatiles by combining patterns of activity across input channels. The lateral horn of the fly informs innate behaviours by combining patterns of second-order olfactory projection neuron (PN) activity. While most odorants only elicit a strong behavioural response after associative learning, ecologically meaningful and evolutionarily significant odour channels trigger innate behavioural responses, likely through hard-wired, genetically and developmentally pre-programmed circuits. The identity and function of third-order neurons, particularly those outside the mushroom body, the centre for associative learning, are poorly understood. Here I present data and analyses for such third-order neurons as well as the tools I have helped to make my analyses possible. Using full synaptic reconstructions for neurons of the lateral horn, I investigate previously unknown connectivity motifs including local neuron feedback onto PN axons, the synaptic budget of olfactory interneurons, olfactory neurons that actually integrate multiple sensory modalities, and the existence of centrifugal connections from higher brain regions, including those involved in the output of associative learning. These motifs are novel findings for both insect and equivalent mammalian circuits. I attempt to relate my findings to physiological and morphological data collected by light microscopy, probe the correlation between morphology and connectivity, the degree of connection stereotypy within isomorphic cell types, and the developmental origins of neurons and their connections. These observations provide specific insights into the structure of this ‘innate behaviour’ brain region and the statistics of its constituent types’ connectivities, as well as circuit hypotheses for how learned and innate olfactory representations may interact.

Degree

thesis:*
Name dc:type.qualificationname
Doctor of Philosophy (PhD)
Level dc:type.qualificationlevel
Doctoral
Grantor dc:publisher.institution
University of Cambridge
Year dc:date.issued
2019

Author and committee

dc:creator, dc:contributor.*
Author dc:creator
  • Bates, Alexander Shakeel
Advisor dc:contributor.advisor
  • Jefferis, Gregory SXE

Subjects

dc:subject × 42

Rights

dc:rights
Language dc:language
eng

Identifiers

dc:identifier.*
DOI dc:identifier.doi
https://doi.org/10.17863/CAM.63180
OAI identifier oai:identifier
oai:www.repository.cam.ac.uk:1810/316072

Chain of custody

source
Harvested from
Cambridge University
Base URL
api.repository.cam.ac.uk/server/oai/request
Last updated
2026-07-22
Source record
OAI-PMH GetRecord
citation

Bates, Alexander Shakeel. The organisation of a third-order olfactory brain region in the vinegar fly. Doctoral thesis, University of Cambridge, 2019. https://doi.org/10.17863/CAM.63180