University of San Francisco
Biochemical Assay Optimization and Computational Screening Efforts to Identify Potential LuxS Inhibitors
Abstract
dc:description.abstract<p>Quorum sensing (QS) is a process of coordination of bacterial gene expression in response to cell population. System two QS is regulated by the small signaling molecule autoinducer-2 (AI-2) and is implicated in the infectious behaviors of various bacterial species. AI-2 is biosynthesized from <em>S-</em>ribosylhomocysteine (SRH) by the enzyme LuxS and induces interspecies cell-to-cell communication. Inhibition of LuxS would therefore inhibit interspecies QS. Herein, a search for novel molecular species that will competitively bind with SRH in the LuxS binding site is performed <em>in silico</em>. Computational screening results are then validated <em>in vitro</em> using an optimized LuxS inhibition assay.</p>
Degree
thesis:*- Name thesis:degree_name
- Master of Science in Chemistry
- Level thesis:degree_level
- Thesis
- Discipline thesis:degree_discipline
- Chemistry
- Year dc:date.available
- 2013
Author and committee
dc:creator, dc:contributor.*- Author dc:creator
-
- Wang, Keeshia Q
- Contributors dc:contributor
-
- Dr. Megan E. Bolitho
- Dr. Lawrence Margerum
- Dr. Jie Jack Li
Subjects
dc:subject × 15- LuxS
- Quorum Sensing
- Arginine
- Ellman's Assay
- Docking
- Inhibitor
- Amino Acids, Peptides, and Proteins
- Biochemical Phenomena, Metabolism, and Nutrition
- Biochemistry
- Biotechnology
- Enzymes and Coenzymes
- Medical Biochemistry
- Other Biochemistry, Biophysics, and Structural Biology
- Other Chemicals and Drugs
- Pharmaceutical Preparations
Identifiers
dc:identifier.*- Repository record dc:identifier
- https://repository.usfca.edu/thes/149
- OAI identifier oai:identifier
- oai:repository.usfca.edu:thes-1168