{"id":{"repo_id":"usfca","oai_identifier":"oai:repository.usfca.edu:thes-1168"},"canonical_url":"https://search.dev.ndltd.org/etd/usfca/oai:repository.usfca.edu:thes-1168","repository":{"repo_id":"usfca","name":"University of San Francisco","base_url":"https://repository.usfca.edu/do/oai/"},"display":{"title":"Biochemical Assay Optimization and Computational Screening Efforts to Identify Potential LuxS Inhibitors","abstract":"<p>Quorum sensing (QS) is a process of coordination of bacterial gene expression in response to cell population. System two QS is regulated by the small signaling molecule autoinducer-2 (AI-2) and is implicated in the infectious behaviors of various bacterial species. AI-2 is biosynthesized from <em>S-</em>ribosylhomocysteine (SRH) by the enzyme LuxS and induces interspecies cell-to-cell communication. Inhibition of LuxS would therefore inhibit interspecies QS. Herein, a search for novel molecular species that will competitively bind with SRH in the LuxS binding site is performed <em>in silico</em>. Computational screening results are then validated <em>in vitro</em> using an optimized LuxS inhibition assay.</p>","abstract_html":"&lt;p&gt;Quorum sensing (QS) is a process of coordination of bacterial gene expression in response to cell population. System two QS is regulated by the small signaling molecule autoinducer-2 (AI-2) and is implicated in the infectious behaviors of various bacterial species. AI-2 is biosynthesized from &lt;em&gt;S-&lt;/em&gt;ribosylhomocysteine (SRH) by the enzyme LuxS and induces interspecies cell-to-cell communication. Inhibition of LuxS would therefore inhibit interspecies QS. Herein, a search for novel molecular species that will competitively bind with SRH in the LuxS binding site is performed &lt;em&gt;in silico&lt;/em&gt;. Computational screening results are then validated &lt;em&gt;in vitro&lt;/em&gt; using an optimized LuxS inhibition assay.&lt;/p&gt;","abstract_has_math":false,"creators":["Wang, Keeshia Q"],"institution":null,"degree_name":"Master of Science in Chemistry","degree_level":"Thesis","degree_discipline":"Chemistry","degree_department":null,"school":null,"contributors":["Dr. Megan E. Bolitho","Dr. Lawrence Margerum","Dr. Jie Jack Li"],"advisors":[],"committee_chairs":[],"committee_members":[],"year":2013,"date_issued":"2013-12-13T08:00:00Z","date_published":"2013-12-13T08:00:00Z","updated_at":"2026-07-24T05:43:17Z","subjects":["LuxS","Quorum Sensing","Arginine","Ellman's Assay","Docking","Inhibitor","Amino Acids, Peptides, and Proteins","Biochemical Phenomena, Metabolism, and Nutrition","Biochemistry","Biotechnology","Enzymes and Coenzymes","Medical Biochemistry","Other Biochemistry, Biophysics, and Structural Biology","Other Chemicals and Drugs","Pharmaceutical Preparations"],"languages":[],"rights":[],"rights_urls":[],"identifier_entries":[]},"links":{"outbound_url":"https://repository.usfca.edu/thes/149","outbound_label":"Repository record","outbound_source":"dc:identifier"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor","label":"Contributor","values":["Dr. Megan E. 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System two QS is regulated by the small signaling molecule autoinducer-2 (AI-2) and is implicated in the infectious behaviors of various bacterial species. AI-2 is biosynthesized from <em>S-</em>ribosylhomocysteine (SRH) by the enzyme LuxS and induces interspecies cell-to-cell communication. Inhibition of LuxS would therefore inhibit interspecies QS. Herein, a search for novel molecular species that will competitively bind with SRH in the LuxS binding site is performed <em>in silico</em>. Computational screening results are then validated <em>in vitro</em> using an optimized LuxS inhibition assay.</p>"]},{"key":"dc:title","label":"Title","values":["Biochemical Assay Optimization and Computational Screening Efforts to Identify Potential LuxS Inhibitors"]}]}],"canonical_facts":{"dc:contributor":["Dr. Megan E. Bolitho","Dr. Lawrence Margerum","Dr. Jie Jack Li"],"dc:creator":["Wang, Keeshia Q"],"dc:date.available":["2015-08-14T07:00:00Z"],"dc:description.abstract":["<p>Quorum sensing (QS) is a process of coordination of bacterial gene expression in response to cell population. System two QS is regulated by the small signaling molecule autoinducer-2 (AI-2) and is implicated in the infectious behaviors of various bacterial species. AI-2 is biosynthesized from <em>S-</em>ribosylhomocysteine (SRH) by the enzyme LuxS and induces interspecies cell-to-cell communication. Inhibition of LuxS would therefore inhibit interspecies QS. Herein, a search for novel molecular species that will competitively bind with SRH in the LuxS binding site is performed <em>in silico</em>. Computational screening results are then validated <em>in vitro</em> using an optimized LuxS inhibition assay.</p>"],"dc:identifier":["https://repository.usfca.edu/thes/149"],"dc:subject":["LuxS","Quorum Sensing","Arginine","Ellman's Assay","Docking","Inhibitor","Amino Acids, Peptides, and Proteins","Biochemical Phenomena, Metabolism, and Nutrition","Biochemistry","Biotechnology","Enzymes and Coenzymes","Medical Biochemistry","Other Biochemistry, Biophysics, and Structural Biology","Other Chemicals and Drugs","Pharmaceutical Preparations"],"dc:title":["Biochemical Assay Optimization and Computational Screening Efforts to Identify Potential LuxS Inhibitors"],"thesis:degree_discipline":["Chemistry"],"thesis:degree_level":["Thesis"],"thesis:degree_name":["Master of Science in Chemistry"]},"updated_at":"2026-07-24T05:43:17Z"}