Platform for spatial molecular data

I designed and implemented a comprehensive platform for storing, analyzing, visualizing, and interacting with spatial molecular data. With the advent of high throughput in situ sequencing methods, such as fluorescent in situ sequencing (FISSEQ), the need for a platform to organize spatial molecular data has become paramount. The platform is divided into seven services: raw data handling, a spatial coordinate system, an analysis service, an image service, a molecular data service, a spatial data service and a visualization service. Together, these services compose a modular system for organizing the next generation of spatial molecular data.

Department dc:contributor.department

Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science.

Grantor dc:publisher

Massachusetts Institute of Technology

Year dc:date.issued

2015

Author dc:creator

• Dasari, Vivek

Advisor dc:contributor.advisor

• Richard Terry and George Church.

• Electrical Engineering and Computer Science.

Statement dc:rights

• MIT theses are protected by copyright. They may be viewed, downloaded, or printed from this source but further reproduction or distribution in any format is prohibited without written permission.

Licence dc:rights.uri

• http://dspace.mit.edu/handle/1721.1/7582

Language dc:language.iso

eng

Handle dc:identifier.uri

http://hdl.handle.net/1721.1/107103

OAI identifier oai:identifier

oai:dspace.mit.edu:1721.1/107103