Abstract
dc:description.abstract<p>This project is focused on understanding the role of calcium in membrane fusion at the atomic level. Membrane fusion is an intense area of experimental research,</p> <p>however, direct imaging of the membrane fusion mechanism has not been possible due to transient nature of the</p> <p>fusion process. As an alternative to experiments, molecular dynamics simulations provide a means to investigate the structure</p> <p>and function of complex biological systems, such as fusion of bilayers with atomic-scale resolution.</p> <p>Nearly 40 years ago, experiments suggested pure phospholipid vesicles may undergo fusion in the presence of Ca<sup>2+</sup>.</p> <p>These experiments have shown that Ca<sup>2+</sup> interacts strongly with apposed bilayers, inducing fusion and</p> <p>forming 1:2 complexes of Ca<sup>2+</sup>/PS. From these results, it was hypothesized that Ca<sup>2+</sup></p> <p>might induce fusion by reducing the electrostatic repulsion between apposed lipid bilayers. Furthermore, it</p> <p>was proposed that in the initial stages of the fusion process, Ca<sup>2+</sup> formed bridges between apposed lipid bilayers,</p> <p>creating an ``anhydrous-complex'', expelling water from the lipid head groups.</p> <p>The formation of the anhydrous complex and expulsion of water from the lipid head groups could lead to bilayer destabilization and eventual fusion.</p> <p>In an effort to understand the role of Ca<sup>2+</sup> in fusion of lipid vesicles, molecular</p> <p>dynamics simulations have been performed on closely apposed lipid bilayers composed of DMPC and POPS in the presence of Ca<sup>2+</sup>.</p> <p>Of particular interest is the formation of the hypothesized anhydrous complex between apposed phospholipids and Ca<sup>2+</sup>, and the</p> <p>effect of Ca<sup>2+</sup> on the hydration and structure of closely apposed lipid bilayers.</p> <p>Molecular dynamics simulations show that</p> <p>Ca<sup>2+</sup> is capable of bridging apposed bilayers.</p> <p>The bridging brings regions of the bilayers into close contact of ∼ 3 Å.</p> <p>This separation is in close agreement with our preliminary simulation with DMP<sup>-</sup> in the presence of Ca<sup>2+</sup>, as well as</p> <p>earlier experimental work. The process of Ca<sup>2+</sup> bridging of apposed lipids results</p> <p>in significant ordering of the lipid tails and bilayer thinning, consistent with simulations of bilayer dehydration,</p> <p>validating our hypothesis that Ca<sup>2+</sup> bridging leads to local dehydration of lipid membranes. Similar calculations</p> <p>performed with Na<sup>+</sup> instead of Ca<sup>2+</sup> did not exhibit bridging of apposed lipid headgroups, illustrating the unique</p> <p>role of Ca<sup>2+</sup>.</p> <p>The simulations presented in this work provide the first evidence from atomistic simulations of the</p> <p>formation of the anhydrous complex hypothesized by experiments.</p>
Degree
thesis:*- Name thesis:degree_name
- Ph.D.
- Level thesis:degree_level
- WSU Access
- Discipline thesis:degree_discipline
- Chemical Engineering and Materials Science
- Year dc:date.available
- 2010
Author and committee
dc:creator, dc:contributor.*- Author dc:creator
-
- Issa, Zeena Kas
- Contributors dc:contributor
-
- Jeffrey J. Potoff
- Charles W. Manke
Subjects
dc:subject × 8Identifiers
dc:identifier.*- Repository record dc:identifier
- https://digitalcommons.wayne.edu/oa_dissertations/170
- OAI identifier oai:identifier
- oai:digitalcommons.wayne.edu:oa_dissertations-1169