Development and Use of an Environmental DNA Tool to Monitor Recovery of the Critically Endangered Smalltooth Sawfish, Pristis pectinata, in the Northwest Atlantic

<p>The Critically Endangered Smalltooth Sawfish, <em>Pristis</em> <em>pectinata</em>, was once common in the tropical and subtropical waters of the Atlantic Ocean; however, following global declines in range and abundance over the past century, individuals were restricted to the waters of south and southwest Florida (SWFL) by about the 1980’s. Recently, public encounter reports have emerged in historically occupied habitats in United States waters, suggesting individuals are present in, or re-occupying, these areas, although the status of <em>P</em>. <em>pectinata</em> outside of SWFL is not currently well understood. Targeted environmental DNA (eDNA) surveys were chosen to assess the occurrence of <em>P</em>. <em>pectinata</em> in these formerly inhabited waters due to the rapid, cost-effective, and non-invasive advantages of this technique over traditional survey methods for <em>P</em>. <em>pectinata</em> like gill nets. This research developed and validated a species-specific eDNA assay capable of targeting <em>P</em>. <em>pectinata</em> DNA in water samples at concentrations as low as 0.08 copies/μL using Droplet Digital™ PCR. This assay was then used in three formerly occupied estuaries in the western Atlantic that had recent, verified encounter reports: Tampa Bay and the Indian River Lagoon (IRL), Florida, and the Mississippi Sound, Mississippi. <em>Pristis</em> <em>pectinata</em> DNA was detected in water samples collected from the IRL in 2018 and 2019, and the Mississippi Sound in 2018, indicating at least one individual was present in the vicinity near the time of sample collection. These results provide another line of evidence for potential re-occupation; however, long-term, comprehensive eDNA surveys are needed to help foster future recovery.</p>

Name thesis:degree_name

Master of Science (MS)

Level thesis:degree_level

Masters Thesis

Year dc:date.available

2020

Author dc:creator

• Lehman, Ryan N

Contributors dc:contributor

• Dr. Nicole M. Phillips
• Ms. Jill M. Hendon
• Dr. Gregg R. Poulakis

• Conservation
• Endangered Species
• Ray
• Droplet Digital™ PCR
• Species recovery
• eDNA
• Genetics

Repository record dc:identifier

https://aquila.usm.edu/masters_theses/769

OAI identifier oai:identifier

oai:aquila.usm.edu:masters_theses-1821