{"id":{"repo_id":"usm","oai_identifier":"oai:aquila.usm.edu:masters_theses-1684"},"canonical_url":"https://search.dev.ndltd.org/etd/usm/oai:aquila.usm.edu:masters_theses-1684","repository":{"repo_id":"usm","name":"University of Southern Mississippi","base_url":"https://aquila.usm.edu/do/oai/"},"display":{"title":"The Evolutionary Diversity and Biological Function of Phenazine Metabolite Biosynthesis in Burkholderia SPP","abstract":"<p><em>Burkholderia </em>encompass a group of ubiquitous Gram-negative bacteria that include numerous saprophytes, as well as several species that cause infections in animals, immunocompromised patients, and plants. Some species of <em>Burkholderia </em>produce colored redox-active secondary metabolites called phenazines (Phz). In the model opportunistic pathogen <em>Pseudomonas aeruginosa</em>, phenazines strongly contribute to the competitiveness, formation of biofilms, and virulence in multiple models of infection. Similar depth of knowledge on the diversity, biosynthesis, and biological functions of phenazines in <em>Burkholderia</em>is missing<em>. </em>This project aimed to bridge this gap in knowledge by focusing on phenazine pathways of <em>B. lata </em>and closely related species. My results revealed that <em>phz</em>genes are present in genomes of many <em>Burkholderia</em>that have a worldwide origin and belong to different species of the genus. Most Phz+ strains were in the Bcc group, but the capacity to synthesize phenazines was also found in some isolates of the <em>B. pseudomallei</em>clade and the plant pathogen <em>B. glumae</em>. My findings also suggest that the phenazine biosynthetic pathway of <em>Burkholderia</em>has a complex evolutionary history, which likely involved horizontal gene transfers among several distantly related groups of producing organisms. I also analyzed isogenic mutants and plasmid deletion derivatives of <em>Burkholderia lata</em>, which helped to identify phenazines produced by species of the ubiquitous <em>B. cepacia</em>(Bcc) group and characterize the role of phenazine-modifying genes in the synthesis of 4,9-dihydroxyphenazine-1,6-dicarboxylic acid dimethylester.My functional studies failed to link the production of phenazines with the capacity of <em>Burkholderia</em>to kill fruit flies and rot onions, but other experiments revealed a link between the presence and amount of phenazines and the dynamics of biofilm growth flow in the flow cell and static experimental systems.</p>","abstract_html":"&lt;p&gt;&lt;em&gt;Burkholderia &lt;/em&gt;encompass a group of ubiquitous Gram-negative bacteria that include numerous saprophytes, as well as several species that cause infections in animals, immunocompromised patients, and plants. Some species of &lt;em&gt;Burkholderia &lt;/em&gt;produce colored redox-active secondary metabolites called phenazines (Phz). In the model opportunistic pathogen &lt;em&gt;Pseudomonas aeruginosa&lt;/em&gt;, phenazines strongly contribute to the competitiveness, formation of biofilms, and virulence in multiple models of infection. Similar depth of knowledge on the diversity, biosynthesis, and biological functions of phenazines in &lt;em&gt;Burkholderia&lt;/em&gt;is missing&lt;em&gt;. &lt;/em&gt;This project aimed to bridge this gap in knowledge by focusing on phenazine pathways of &lt;em&gt;B. lata &lt;/em&gt;and closely related species. My results revealed that &lt;em&gt;phz&lt;/em&gt;genes are present in genomes of many &lt;em&gt;Burkholderia&lt;/em&gt;that have a worldwide origin and belong to different species of the genus. Most Phz+ strains were in the Bcc group, but the capacity to synthesize phenazines was also found in some isolates of the &lt;em&gt;B. pseudomallei&lt;/em&gt;clade and the plant pathogen &lt;em&gt;B. glumae&lt;/em&gt;. My findings also suggest that the phenazine biosynthetic pathway of &lt;em&gt;Burkholderia&lt;/em&gt;has a complex evolutionary history, which likely involved horizontal gene transfers among several distantly related groups of producing organisms. I also analyzed isogenic mutants and plasmid deletion derivatives of &lt;em&gt;Burkholderia lata&lt;/em&gt;, which helped to identify phenazines produced by species of the ubiquitous &lt;em&gt;B. cepacia&lt;/em&gt;(Bcc) group and characterize the role of phenazine-modifying genes in the synthesis of 4,9-dihydroxyphenazine-1,6-dicarboxylic acid dimethylester.My functional studies failed to link the production of phenazines with the capacity of &lt;em&gt;Burkholderia&lt;/em&gt;to kill fruit flies and rot onions, but other experiments revealed a link between the presence and amount of phenazines and the dynamics of biofilm growth flow in the flow cell and static experimental systems.&lt;/p&gt;","abstract_has_math":false,"creators":["Hendry, Samuel"],"institution":null,"degree_name":"Master of Science (MS)","degree_level":"Masters Thesis","degree_discipline":null,"degree_department":null,"school":null,"contributors":["Dmitri Mavrodi","Janet Donaldson","Mohamed Elasri"],"advisors":[],"committee_chairs":[],"committee_members":[],"year":2019,"date_issued":"2019-08-01T07:00:00Z","date_published":"2019-08-01T07:00:00Z","updated_at":"2026-07-24T05:45:12Z","subjects":["phenazines","burkholderia","biology","diversity","Bacteriology"],"languages":[],"rights":[],"rights_urls":[],"identifier_entries":[]},"links":{"outbound_url":"https://aquila.usm.edu/masters_theses/653","outbound_label":"Repository record","outbound_source":"dc:identifier"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor","label":"Contributor","values":["Dmitri Mavrodi","Janet Donaldson","Mohamed Elasri"]},{"key":"dc:creator","label":"Author","values":["Hendry, Samuel"]}]},{"id":"academic_context","label":"Academic Context","entries":[{"key":"dc:date.available","label":"Dc Date Available","values":["2021-08-01T07:00:00Z"]},{"key":"thesis:degree_level","label":"Degree Level","values":["Masters Thesis"]},{"key":"thesis:degree_name","label":"Degree Name","values":["Master of Science (MS)"]}]},{"id":"subjects_keywords","label":"Subjects and Keywords","entries":[{"key":"dc:subject","label":"Dc Subject","values":["phenazines","burkholderia","biology","diversity","Bacteriology"]}]},{"id":"identifiers","label":"Identifiers","entries":[{"key":"dc:identifier","label":"Identifier","values":["https://aquila.usm.edu/masters_theses/653"]}]},{"id":"additional","label":"Additional Metadata","entries":[{"key":"dc:description.abstract","label":"Abstract","values":["<p><em>Burkholderia </em>encompass a group of ubiquitous Gram-negative bacteria that include numerous saprophytes, as well as several species that cause infections in animals, immunocompromised patients, and plants. Some species of <em>Burkholderia </em>produce colored redox-active secondary metabolites called phenazines (Phz). In the model opportunistic pathogen <em>Pseudomonas aeruginosa</em>, phenazines strongly contribute to the competitiveness, formation of biofilms, and virulence in multiple models of infection. Similar depth of knowledge on the diversity, biosynthesis, and biological functions of phenazines in <em>Burkholderia</em>is missing<em>. </em>This project aimed to bridge this gap in knowledge by focusing on phenazine pathways of <em>B. lata </em>and closely related species. My results revealed that <em>phz</em>genes are present in genomes of many <em>Burkholderia</em>that have a worldwide origin and belong to different species of the genus. Most Phz+ strains were in the Bcc group, but the capacity to synthesize phenazines was also found in some isolates of the <em>B. pseudomallei</em>clade and the plant pathogen <em>B. glumae</em>. My findings also suggest that the phenazine biosynthetic pathway of <em>Burkholderia</em>has a complex evolutionary history, which likely involved horizontal gene transfers among several distantly related groups of producing organisms. I also analyzed isogenic mutants and plasmid deletion derivatives of <em>Burkholderia lata</em>, which helped to identify phenazines produced by species of the ubiquitous <em>B. cepacia</em>(Bcc) group and characterize the role of phenazine-modifying genes in the synthesis of 4,9-dihydroxyphenazine-1,6-dicarboxylic acid dimethylester.My functional studies failed to link the production of phenazines with the capacity of <em>Burkholderia</em>to kill fruit flies and rot onions, but other experiments revealed a link between the presence and amount of phenazines and the dynamics of biofilm growth flow in the flow cell and static experimental systems.</p>"]},{"key":"dc:title","label":"Title","values":["The Evolutionary Diversity and Biological Function of Phenazine Metabolite Biosynthesis in Burkholderia SPP"]}]}],"canonical_facts":{"dc:contributor":["Dmitri Mavrodi","Janet Donaldson","Mohamed Elasri"],"dc:creator":["Hendry, Samuel"],"dc:date.available":["2021-08-01T07:00:00Z"],"dc:description.abstract":["<p><em>Burkholderia </em>encompass a group of ubiquitous Gram-negative bacteria that include numerous saprophytes, as well as several species that cause infections in animals, immunocompromised patients, and plants. Some species of <em>Burkholderia </em>produce colored redox-active secondary metabolites called phenazines (Phz). In the model opportunistic pathogen <em>Pseudomonas aeruginosa</em>, phenazines strongly contribute to the competitiveness, formation of biofilms, and virulence in multiple models of infection. Similar depth of knowledge on the diversity, biosynthesis, and biological functions of phenazines in <em>Burkholderia</em>is missing<em>. </em>This project aimed to bridge this gap in knowledge by focusing on phenazine pathways of <em>B. lata </em>and closely related species. My results revealed that <em>phz</em>genes are present in genomes of many <em>Burkholderia</em>that have a worldwide origin and belong to different species of the genus. Most Phz+ strains were in the Bcc group, but the capacity to synthesize phenazines was also found in some isolates of the <em>B. pseudomallei</em>clade and the plant pathogen <em>B. glumae</em>. My findings also suggest that the phenazine biosynthetic pathway of <em>Burkholderia</em>has a complex evolutionary history, which likely involved horizontal gene transfers among several distantly related groups of producing organisms. I also analyzed isogenic mutants and plasmid deletion derivatives of <em>Burkholderia lata</em>, which helped to identify phenazines produced by species of the ubiquitous <em>B. cepacia</em>(Bcc) group and characterize the role of phenazine-modifying genes in the synthesis of 4,9-dihydroxyphenazine-1,6-dicarboxylic acid dimethylester.My functional studies failed to link the production of phenazines with the capacity of <em>Burkholderia</em>to kill fruit flies and rot onions, but other experiments revealed a link between the presence and amount of phenazines and the dynamics of biofilm growth flow in the flow cell and static experimental systems.</p>"],"dc:identifier":["https://aquila.usm.edu/masters_theses/653"],"dc:subject":["phenazines","burkholderia","biology","diversity","Bacteriology"],"dc:title":["The Evolutionary Diversity and Biological Function of Phenazine Metabolite Biosynthesis in Burkholderia SPP"],"thesis:degree_level":["Masters Thesis"],"thesis:degree_name":["Master of Science (MS)"]},"updated_at":"2026-07-24T05:45:12Z"}