Back to results

UNSW, Sydney

The genetics of atrial septal defect and patent foramen ovale

Abstract

dc:description

Congenital heart disease is the most common form of birth defect, affecting approximately 1% of liveborn babies. Secundum atrial septal defect (ASD) is the second most common form of congenital heart disease (CHD). Most cases have no known cause. Chromosomal, syndromal and teratogenic causes account for a minority of cases. The hypothesis that mutations in the ASD genes NKX2-5 and GATA4 may cause apparently sporadic ASD was tested by sequencing them in unrelated probands with ASD. In this study, 1/102 individuals with ASD had an NKX2-5 mutation, and 1/129 had a deletion of the GATA4 gene. The cardiac transcription factor TBX20 interacts with other ASD genes but had not previously been associated with human disease. Of 352 individuals with CHD, including 175 with ASD, 2 individuals, each with a family history of CHD, had pathogenic mutations in TBX20. Phenotypes included ASD, VSD, valvular abnormalities and dilated cardiomyopathy. These studies of NKX2-5, GATA4 and TBX20 indicate that dominant ASD genes account for a small minority of cases of ASD, and emphasize the considerable genetic heterogeneity in dominant ASD (also caused by mutations in MYH6 and ACTC). A new syndrome of dominant ASD and the Marcus Gunn jaw winking phenomenon is reported. Linkage to known loci was excluded, extending this heterogeneity, but a whole genome scan did not identify a candidate locus for this disorder. Previous studies of inbred laboratory mice showed an association between patent foramen ovale (PFO) and measures of atrial septal morphology, particularly septum primum length (“flap valve length” or FVL). In humans, PFO is associated with cryptogenic stroke and migraine, and is regarded as being in a pathological contiuum with ASD. Twelve inbred strains, including 129T2/SvEms and QSi5, were studied, with generation of [129T2/SvEms x QSi5] F1, F2 and F14 mice. Studies of atrial morphology in 3017 mice confirmed the relationship between FVL and PFO but revealed considerable complexity. An F2 mapping study identified 7 significant and 6 suggestive quantitative trait loci (QTL), affecting FVL and two other traits, foramen ovale width (FOW) and crescent width (CRW). Binary analysis of PFO supported four of these.

Degree

thesis:*
Grantor dc:publisher
UNSW, Sydney
Year dc:date
2007

Author and committee

dc:creator, dc:contributor.*
Author dc:creator
  • Kirk, Edwin Philip Enfield

Subjects

dc:subject × 6

Rights

dc:rights
Statement dc:rights
  • open access
  • CC BY-NC-ND 3.0
  • free_to_read
Language dc:language
EN

Identifiers

dc:identifier.*
OAI identifier oai:identifier
oai:unsworks.library.unsw.edu.au:1959.4/34759

Chain of custody

source
Harvested from
University of New South Wales
Base URL
unsworks.unsw.edu.au/oai/provider
Last updated
2026-07-24
Source record
OAI-PMH GetRecord
citation

Kirk, Edwin Philip Enfield. The genetics of atrial septal defect and patent foramen ovale. UNSW, Sydney, 2007. http://hdl.handle.net/1959.4/34759