{"id":{"repo_id":"uiuc","oai_identifier":"oai:www.ideals.illinois.edu:2142/85020"},"canonical_url":"https://search.dev.ndltd.org/etd/uiuc/oai:www.ideals.illinois.edu:2142/85020","repository":{"repo_id":"uiuc","name":"University of Illinois - Urbana-Champaign","base_url":"https://www.ideals.illinois.edu/oai-pmh"},"display":{"title":"Effects of Heterodera Glycines Population Densities on Fusarium Solani F. Sp. Glycines Colonization of Soybean Roots and Development of Sudden Death Syndrome","abstract":"Estimation of root colonization by Fsg with the plating bioassay was difficult and the results were often unsatisfactory in these experiments. Therefore, an alternative method was explored, relative quantification with real-time quantitative PCR (QPCR), to estimate fungal colonization of soybean roots. QPCR was more sensitive than the plating bioassays at detecting the fungus: Fsg DNA was detected in 371 out of 372 root samples with QPCR, while CFU were only detected in 14.5% of the samples with the plating bioassay. The plating bioassay required at least 10 days longer to complete and the results had higher variability than those obtained with QPCR. Overall, QPCR had many advantages over the plating bioassay and has the potential for several more practical applications.","abstract_html":"Estimation of root colonization by Fsg with the plating bioassay was difficult and the results were often unsatisfactory in these experiments. Therefore, an alternative method was explored, relative quantification with real-time quantitative PCR (QPCR), to estimate fungal colonization of soybean roots. QPCR was more sensitive than the plating bioassays at detecting the fungus: Fsg DNA was detected in 371 out of 372 root samples with QPCR, while CFU were only detected in 14.5% of the samples with the plating bioassay. The plating bioassay required at least 10 days longer to complete and the results had higher variability than those obtained with QPCR. Overall, QPCR had many advantages over the plating bioassay and has the potential for several more practical applications.","abstract_has_math":false,"creators":["Jackson, Tamra A."],"institution":"University of Illinois at Urbana-Champaign","degree_name":"Ph.D.","degree_level":"Dissertation","degree_discipline":"Crop Sciences","degree_department":null,"school":null,"contributors":["Niblack, Terry L."],"advisors":[],"committee_chairs":[],"committee_members":[],"year":2015,"date_issued":"2015-09-25T22:33:29Z","date_published":"2015-09-25T22:33:29Z","updated_at":"2026-07-22T22:26:24Z","subjects":["Biology, Microbiology"],"languages":["eng"],"rights":[],"rights_urls":[],"identifier_entries":[{"key":"dc:identifier","label":"Identifier","values":["(MiAaPQ)AAI3182286"],"render_values":[{"text":"(MiAaPQ)AAI3182286","href":null,"code":true}]}]},"links":{"outbound_url":"http://hdl.handle.net/2142/85020","outbound_label":"Handle","outbound_source":"dc:identifier"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor","label":"Contributor","values":["Niblack, Terry L."]},{"key":"dc:creator","label":"Author","values":["Jackson, Tamra A."]}]},{"id":"academic_context","label":"Academic Context","entries":[{"key":"dc:date","label":"Dc Date","values":["2015-09-25T22:33:29Z","10000-01-01","2005"]},{"key":"dc:type","label":"Dc Type","values":["text"]},{"key":"thesis:degree_discipline","label":"Discipline","values":["Crop Sciences"]},{"key":"thesis:degree_level","label":"Degree Level","values":["Dissertation"]},{"key":"thesis:degree_name","label":"Degree Name","values":["Ph.D."]},{"key":"thesis:institution_name","label":"Thesis Institution Name","values":["University of Illinois at Urbana-Champaign"]}]},{"id":"subjects_keywords","label":"Subjects and Keywords","entries":[{"key":"dc:subject","label":"Dc Subject","values":["Biology, Microbiology"]}]},{"id":"language_rights","label":"Language and Rights","entries":[{"key":"dc:language","label":"Dc Language","values":["eng"]}]},{"id":"identifiers","label":"Identifiers","entries":[{"key":"dc:identifier","label":"Identifier","values":["http://hdl.handle.net/2142/85020","(MiAaPQ)AAI3182286"]}]},{"id":"additional","label":"Additional Metadata","entries":[{"key":"dc:description","label":"Description","values":["Estimation of root colonization by Fsg with the plating bioassay was difficult and the results were often unsatisfactory in these experiments. Therefore, an alternative method was explored, relative quantification with real-time quantitative PCR (QPCR), to estimate fungal colonization of soybean roots. QPCR was more sensitive than the plating bioassays at detecting the fungus: Fsg DNA was detected in 371 out of 372 root samples with QPCR, while CFU were only detected in 14.5% of the samples with the plating bioassay. The plating bioassay required at least 10 days longer to complete and the results had higher variability than those obtained with QPCR. Overall, QPCR had many advantages over the plating bioassay and has the potential for several more practical applications.","Made available in DSpace on 2015-09-25T22:33:29Z (GMT). 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Glycines Colonization of Soybean Roots and Development of Sudden Death Syndrome"]}]}],"canonical_facts":{"dc:contributor":["Niblack, Terry L."],"dc:creator":["Jackson, Tamra A."],"dc:date":["2015-09-25T22:33:29Z","10000-01-01","2005"],"dc:description":["Estimation of root colonization by Fsg with the plating bioassay was difficult and the results were often unsatisfactory in these experiments. Therefore, an alternative method was explored, relative quantification with real-time quantitative PCR (QPCR), to estimate fungal colonization of soybean roots. QPCR was more sensitive than the plating bioassays at detecting the fungus: Fsg DNA was detected in 371 out of 372 root samples with QPCR, while CFU were only detected in 14.5% of the samples with the plating bioassay. The plating bioassay required at least 10 days longer to complete and the results had higher variability than those obtained with QPCR. 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