{"id":{"repo_id":"toronto-retro","oai_identifier":"oai:utoronto.scholaris.ca:1807/150137"},"canonical_url":"https://search.dev.ndltd.org/etd/toronto-retro/oai:utoronto.scholaris.ca:1807/150137","repository":{"repo_id":"toronto-retro","name":"University of Toronto","base_url":"https://utoronto.scholaris.ca/server/oai/request"},"display":{"title":"Passive Acoustic Mapping of Microbubbles in Focused Ultrasound Induced Brain Therapies for Preclinical Studies","abstract":"Safe and targeted agent delivery to the brain is critical in developing new therapies for highly prevalent brain disorders. Microbubble (MB) - mediated, focused ultrasound (FUS) can temporarily modulate blood-brain barrier permeability (BBBM) to enhance local agent delivery. To explore new brain therapies for clinical uses, preclinical studies in rodent models with precise anatomical targeting and monitoring must be conducted. This thesis discusses the development of a high-resolution transmit-receive FUS array with a novel broadband receiver designed to conduct BBBM treatment for preclinical studies through precise anatomical targeting and acoustic monitoring in rodent models, and feasibility of super localized brain therapy via MB localization with short bursts. A broadband square aperture (1.2 mm^2, thickness = 110 µm) polyvinylidene fluoride receiver was designed and characterized. With the sensitivity per unit area comparable to that of a commercial needle hydrophone in the low megahertz range, a 54° −6 dB acceptance angle at 1.1 MHz, and a low-cost, batch-wise fabrication protocol, the receiver was then used to construct a receive array. An initial ultrasound-propagation simulation study was conducted to optimize the sparse array layout for both transmit and receive. A 256-element sparse hemispherical array (diameter = 100 mm) was constructed by assembling 128 PZT cylinder transmitters (resonance frequency = 1.2 MHz) and 128 broadband PVDF receivers onto a 3D-printed scaffold. The array is able to spatially map MB cloud activity in a vessel-mimicking phantom at sub-, ultra-, and second-harmonic frequencies with high transmit precision. Preliminary in vivo work demonstrated feasibility of this array in inducing localized BBB permeability changes with 3D sub-harmonic MB passive acoustic mapping feedback control in a mouse model. Moreover, the feasibility of super-localized brain therapy using short bursts and localized MBs via a 3D passive acoustic mapping approach. MB cavitation dynamics and feasibility of super resolution imaging and therapy with short bursts were examined with short time passive mapping in vivo. The small form factor phased array and super localized brain therapy technique developed over the course of this thesis are expected to facilitate preclinical studies of FUS-mediated brain therapies to explore novel therapeutic strategies for future clinical applications.","abstract_html":"Safe and targeted agent delivery to the brain is critical in developing new therapies for highly prevalent brain disorders. Microbubble (MB) - mediated, focused ultrasound (FUS) can temporarily modulate blood-brain barrier permeability (BBBM) to enhance local agent delivery. To explore new brain therapies for clinical uses, preclinical studies in rodent models with precise anatomical targeting and monitoring must be conducted. This thesis discusses the development of a high-resolution transmit-receive FUS array with a novel broadband receiver designed to conduct BBBM treatment for preclinical studies through precise anatomical targeting and acoustic monitoring in rodent models, and feasibility of super localized brain therapy via MB localization with short bursts. A broadband square aperture (1.2 mm^2, thickness = 110 µm) polyvinylidene fluoride receiver was designed and characterized. With the sensitivity per unit area comparable to that of a commercial needle hydrophone in the low megahertz range, a 54° −6 dB acceptance angle at 1.1 MHz, and a low-cost, batch-wise fabrication protocol, the receiver was then used to construct a receive array. An initial ultrasound-propagation simulation study was conducted to optimize the sparse array layout for both transmit and receive. A 256-element sparse hemispherical array (diameter = 100 mm) was constructed by assembling 128 PZT cylinder transmitters (resonance frequency = 1.2 MHz) and 128 broadband PVDF receivers onto a 3D-printed scaffold. The array is able to spatially map MB cloud activity in a vessel-mimicking phantom at sub-, ultra-, and second-harmonic frequencies with high transmit precision. Preliminary in vivo work demonstrated feasibility of this array in inducing localized BBB permeability changes with 3D sub-harmonic MB passive acoustic mapping feedback control in a mouse model. Moreover, the feasibility of super-localized brain therapy using short bursts and localized MBs via a 3D passive acoustic mapping approach. MB cavitation dynamics and feasibility of super resolution imaging and therapy with short bursts were examined with short time passive mapping in vivo. The small form factor phased array and super localized brain therapy technique developed over the course of this thesis are expected to facilitate preclinical studies of FUS-mediated brain therapies to explore novel therapeutic strategies for future clinical applications.","abstract_has_math":false,"creators":["Lin, Yi"],"institution":null,"degree_name":null,"degree_level":null,"degree_discipline":null,"degree_department":"Medical Biophysics","school":null,"contributors":[],"advisors":["Hynynen, Kullervo"],"committee_chairs":[],"committee_members":[],"year":2025,"date_issued":"2025-10","date_published":"2025-10","updated_at":"2026-07-27T21:28:20Z","subjects":["focused ultrasound","microbubble","passive acoustic mapping","super-resolution","transducer"],"languages":[],"rights":[],"rights_urls":[],"identifier_entries":[]},"links":{"outbound_url":"https://hdl.handle.net/1807/150137","outbound_label":"Handle","outbound_source":"dc:identifier.uri"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor.advisor","label":"Advisor","values":["Hynynen, Kullervo"]},{"key":"dc:contributor.department","label":"Department","values":["Medical Biophysics"]},{"key":"dc:creator","label":"Author","values":["Lin, Yi"]}]},{"id":"academic_context","label":"Academic Context","entries":[{"key":"dc:date","label":"Dc Date","values":["2025-10"]},{"key":"dc:date.accessioned","label":"Dc Date Accessioned","values":["2025-11-28T17:21:25Z"]},{"key":"dc:date.issued","label":"Date","values":["2025-10"]},{"key":"dc:type","label":"Dc Type","values":["Thesis"]}]},{"id":"subjects_keywords","label":"Subjects and Keywords","entries":[{"key":"dc:subject","label":"Dc Subject","values":["focused ultrasound","microbubble","passive acoustic mapping","super-resolution","transducer"]}]},{"id":"identifiers","label":"Identifiers","entries":[{"key":"dc:identifier.uri","label":"Identifier URI","values":["https://hdl.handle.net/1807/150137"]}]},{"id":"additional","label":"Additional Metadata","entries":[{"key":"dc:description.abstract","label":"Abstract","values":["Safe and targeted agent delivery to the brain is critical in developing new therapies for highly prevalent brain disorders. Microbubble (MB) - mediated, focused ultrasound (FUS) can temporarily modulate blood-brain barrier permeability (BBBM) to enhance local agent delivery. To explore new brain therapies for clinical uses, preclinical studies in rodent models with precise anatomical targeting and monitoring must be conducted. This thesis discusses the development of a high-resolution transmit-receive FUS array with a novel broadband receiver designed to conduct BBBM treatment for preclinical studies through precise anatomical targeting and acoustic monitoring in rodent models, and feasibility of super localized brain therapy via MB localization with short bursts. A broadband square aperture (1.2 mm^2, thickness = 110 µm) polyvinylidene fluoride receiver was designed and characterized. With the sensitivity per unit area comparable to that of a commercial needle hydrophone in the low megahertz range, a 54° −6 dB acceptance angle at 1.1 MHz, and a low-cost, batch-wise fabrication protocol, the receiver was then used to construct a receive array. An initial ultrasound-propagation simulation study was conducted to optimize the sparse array layout for both transmit and receive. A 256-element sparse hemispherical array (diameter = 100 mm) was constructed by assembling 128 PZT cylinder transmitters (resonance frequency = 1.2 MHz) and 128 broadband PVDF receivers onto a 3D-printed scaffold. The array is able to spatially map MB cloud activity in a vessel-mimicking phantom at sub-, ultra-, and second-harmonic frequencies with high transmit precision. Preliminary in vivo work demonstrated feasibility of this array in inducing localized BBB permeability changes with 3D sub-harmonic MB passive acoustic mapping feedback control in a mouse model. Moreover, the feasibility of super-localized brain therapy using short bursts and localized MBs via a 3D passive acoustic mapping approach. MB cavitation dynamics and feasibility of super resolution imaging and therapy with short bursts were examined with short time passive mapping in vivo. The small form factor phased array and super localized brain therapy technique developed over the course of this thesis are expected to facilitate preclinical studies of FUS-mediated brain therapies to explore novel therapeutic strategies for future clinical applications."]},{"key":"dc:description.degree","label":"Dc Description Degree","values":["Ph.D."]},{"key":"dc:title","label":"Title","values":["Passive Acoustic Mapping of Microbubbles in Focused Ultrasound Induced Brain Therapies for Preclinical Studies"]}]}],"canonical_facts":{"dc:contributor.advisor":["Hynynen, Kullervo"],"dc:contributor.department":["Medical Biophysics"],"dc:creator":["Lin, Yi"],"dc:date":["2025-10"],"dc:date.accessioned":["2025-11-28T17:21:25Z"],"dc:date.issued":["2025-10"],"dc:description.abstract":["Safe and targeted agent delivery to the brain is critical in developing new therapies for highly prevalent brain disorders. Microbubble (MB) - mediated, focused ultrasound (FUS) can temporarily modulate blood-brain barrier permeability (BBBM) to enhance local agent delivery. To explore new brain therapies for clinical uses, preclinical studies in rodent models with precise anatomical targeting and monitoring must be conducted. This thesis discusses the development of a high-resolution transmit-receive FUS array with a novel broadband receiver designed to conduct BBBM treatment for preclinical studies through precise anatomical targeting and acoustic monitoring in rodent models, and feasibility of super localized brain therapy via MB localization with short bursts. A broadband square aperture (1.2 mm^2, thickness = 110 µm) polyvinylidene fluoride receiver was designed and characterized. With the sensitivity per unit area comparable to that of a commercial needle hydrophone in the low megahertz range, a 54° −6 dB acceptance angle at 1.1 MHz, and a low-cost, batch-wise fabrication protocol, the receiver was then used to construct a receive array. An initial ultrasound-propagation simulation study was conducted to optimize the sparse array layout for both transmit and receive. A 256-element sparse hemispherical array (diameter = 100 mm) was constructed by assembling 128 PZT cylinder transmitters (resonance frequency = 1.2 MHz) and 128 broadband PVDF receivers onto a 3D-printed scaffold. The array is able to spatially map MB cloud activity in a vessel-mimicking phantom at sub-, ultra-, and second-harmonic frequencies with high transmit precision. Preliminary in vivo work demonstrated feasibility of this array in inducing localized BBB permeability changes with 3D sub-harmonic MB passive acoustic mapping feedback control in a mouse model. Moreover, the feasibility of super-localized brain therapy using short bursts and localized MBs via a 3D passive acoustic mapping approach. MB cavitation dynamics and feasibility of super resolution imaging and therapy with short bursts were examined with short time passive mapping in vivo. The small form factor phased array and super localized brain therapy technique developed over the course of this thesis are expected to facilitate preclinical studies of FUS-mediated brain therapies to explore novel therapeutic strategies for future clinical applications."],"dc:description.degree":["Ph.D."],"dc:identifier.uri":["https://hdl.handle.net/1807/150137"],"dc:subject":["focused ultrasound","microbubble","passive acoustic mapping","super-resolution","transducer"],"dc:title":["Passive Acoustic Mapping of Microbubbles in Focused Ultrasound Induced Brain Therapies for Preclinical Studies"],"dc:type":["Thesis"]},"updated_at":"2026-07-27T21:28:20Z"}