The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was investigated for all four and six codon families to identify the role of context dependency on synonymous codon usage. Genome signatures of four nucleotide words were used to identify the distribution, magnitude and nucleotide contextual patterns.
","abstract_html":"<p>The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was investigated for all four and six codon families to identify the role of context dependency on synonymous codon usage. Genome signatures of four nucleotide words were used to identify the distribution, magnitude and nucleotide contextual patterns.</p>","abstract_has_math":false,"creators":["Mingo, Vida"],"institution":null,"degree_name":"Ph.D.","degree_level":"Campus Access Dissertation","degree_discipline":"Biological Sciences","degree_department":null,"school":null,"contributors":["Bert Ely"],"advisors":[],"committee_chairs":[],"committee_members":[],"year":2010,"date_issued":"2010-01-01T08:00:00Z","date_published":"2010-01-01T08:00:00Z","updated_at":"2026-07-24T04:37:21Z","subjects":["Life Sciences","Medicine and Health Sciences","Physical Sciences and Mathematics","codon usage","Context dependent codon bias","Genome signatures"],"languages":[],"rights":["© 2010, Vida Mingo"],"rights_urls":[],"identifier_entries":[]},"links":{"outbound_url":"https://scholarcommons.sc.edu/etd/223","outbound_label":"Repository record","outbound_source":"dc:identifier"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor","label":"Contributor","values":["Bert Ely"]},{"key":"dc:creator","label":"Author","values":["Mingo, Vida"]}]},{"id":"academic_context","label":"Academic Context","entries":[{"key":"thesis:degree_discipline","label":"Discipline","values":["Biological Sciences"]},{"key":"thesis:degree_level","label":"Degree Level","values":["Campus Access Dissertation"]},{"key":"thesis:degree_name","label":"Degree Name","values":["Ph.D."]}]},{"id":"subjects_keywords","label":"Subjects and Keywords","entries":[{"key":"dc:subject","label":"Dc Subject","values":["Life Sciences","Medicine and Health Sciences","Physical Sciences and Mathematics","codon usage","Context dependent codon bias","Genome signatures"]}]},{"id":"language_rights","label":"Language and Rights","entries":[{"key":"dc:rights","label":"Dc Rights","values":["© 2010, Vida Mingo"]}]},{"id":"identifiers","label":"Identifiers","entries":[{"key":"dc:identifier","label":"Identifier","values":["https://scholarcommons.sc.edu/etd/223"]}]},{"id":"additional","label":"Additional Metadata","entries":[{"key":"dc:description.abstract","label":"Abstract","values":["The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was investigated for all four and six codon families to identify the role of context dependency on synonymous codon usage. Genome signatures of four nucleotide words were used to identify the distribution, magnitude and nucleotide contextual patterns.
"]},{"key":"dc:title","label":"Title","values":["Genome Signatures Reveal the Importance of Context Dependent Codon Bias In A Range of Bacterial Genomes"]}]}],"canonical_facts":{"dc:contributor":["Bert Ely"],"dc:creator":["Mingo, Vida"],"dc:description.abstract":["The relationship of nucleotide context on fifteen evolutionarily distinct bacterial species was investigated for all four and six codon families to identify the role of context dependency on synonymous codon usage. Genome signatures of four nucleotide words were used to identify the distribution, magnitude and nucleotide contextual patterns.
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