ChemWARD : extracting chemical structure from printed diagrams

Over the years, a vast amount of literature in the field of chemistry has accumulated, and searching for documents about specific molecules is a formidable task. To the extent that the literature is textual, services like Google enable relatively easy search. While search indexes like Google are very good at finding such things, its difficult to describe molecules completely using text because text can't easily indicate molecular structure, and molecular structure defines chemical properties. ChemWARD is a system that extracts the molecular structure from the printed diagrams that are ubiquitous in chemistry literature and converts them to a machine readable format in order to allow chemists to search the literature by drawing a molecular structure instead of typing a chemical formula. We describe the architecture of the system and report on its performance, demonstrating its ability to achieve an overall accuracy rate of 85.5% on printed diagrams extracted from published chemical literature.

Department dc:contributor.department

Massachusetts Institute of Technology. Dept. of Electrical Engineering and Computer Science.

Grantor dc:publisher

Massachusetts Institute of Technology

Year dc:date.issued

2009

Author dc:creator

• Moscicki, Angelique (Angelique E.)

Advisor dc:contributor.advisor

• Randall Davis.

• Electrical Engineering and Computer Science.

Statement dc:rights

• M.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission.

Licence dc:rights.uri

• http://dspace.mit.edu/handle/1721.1/7582

Language dc:language.iso

eng

Handle dc:identifier.uri

http://hdl.handle.net/1721.1/61299

OAI identifier oai:identifier

oai:dspace.mit.edu:1721.1/61299