{"id":{"repo_id":"calpoly","oai_identifier":"oai:digitalcommons.calpoly.edu:theses-2770"},"canonical_url":"https://search.dev.ndltd.org/etd/calpoly/oai:digitalcommons.calpoly.edu:theses-2770","repository":{"repo_id":"calpoly","name":"Cal Poly","base_url":"https://digitalcommons.calpoly.edu/do/oai/"},"display":{"title":"Investigating Novel Approaches for the Integrated Control of the Soilborne Strawberry Pathogens Macrophomina phaseolina and Fusarium oxysporum f. sp. fragariae","abstract":"<p><em>Macrophomina phaseolina </em>(<em>Mp) </em>and <em>Fusarium oxysporum</em> f. sp. <em>fragariae</em> (<em>Fof</em>) are emerging soilborne pathogens causing crown rot and Fusarium wilt, respectively, in commercial strawberry production in California. Fungicides representing eight active ingredients from four different mode of action groups (FRAC groups 1, 3, 7 and 12) were evaluated for their efficacy against each pathogen <em>in vitro</em> and each disease <em>in planta</em>. Fungicide active ingredients were evaluated for their ability to inhibit mycelial growth of both pathogens <em>in vitro</em>. Half-strength potato dextrose agar was amended with six different concentrations (0.01, 0.1, 1.0, 5.0, 10, 50 µg a.i./ml) of seven fungicides in FRAC groups 3, 7 and 12. Concentrations that inhibited fungal growth by 75% (EC<sub>75</sub>) compared to unamended media were determined for two different isolates each of <em>Mp</em> and <em>Fof</em> and were used to determine fungicide rates for subsequent <em>in planta</em> studies. Tebuconazole strongly inhibited the mycelial growth of both pathogens (average EC<sub>75</sub> for <em>Mp</em> was 2.4 ppm; average EC<sub>75</sub> for <em>Fof</em> was 7.48 ppm), as did metconazole (average EC<sub>75</sub> for <em>Mp</em> was2.53 ppm; average EC<sub>75</sub> for <em>Fof</em> was 1.28 ppm). Fludioxonil strongly inhibited mycelial growth of <em>Mp</em>, but had no impact on the growth of <em>Fof</em>. Penthiopyrad, fluopyram, flutriafol, and flutolanil were less effective at inhibiting fungal growth of either fungus. Greenhouse <em>in planta </em>studies evaluated twenty-four fungicide treatments (eight fungicides at low, med and high rates) that were drench applied to infested potting media two days prior to planting of pathogen susceptible strawberry cultivars (San Andreas for <em>Mp</em> and Monterey for <em>Fof</em>) and again at day 21. Controls were a non-inoculated and an inoculated water-drench treatment. Buried inoculum was recovered at days 2 and 23 and plated on selective media for colony forming unit (CFU) quantification. Plant disease assessments were made each week for 11 weeks. An analysis of variance (ANOVA) of CFUs revealed no significant differences (p > 0.05) among treatments and when compared to the non-treated control for both <em>Mp</em> and <em>Fof</em>, but showed significant decreases (p < 0.05) in CFUs between weeks 1 and 3 for both <em>Mp</em> and <em>Fof</em>. An ANOVA for disease assessments in the form of area under the disease progress curve (AUDPC) showed significant decreases of disease severity in treatments with penthiopyrad only (low, medium and high rates) (p < 0.05). There were no significant differences (p > 0.05) in AUDPC among treatments and when compared to the non-inoculated and no-fungicide controls for <em>Fof</em>. The data indicates that these fungicides used alone are not effective against these pathogens <em>in planta</em>.</p> <p>A strawberry plant extract (germination stimulant) was assessed for its ability to stimulate germination of <em>Mp</em> microsclerotia <em>in vitro</em> and <em>in planta</em>. The germination stimulant was applied as a drench at six different concentrations (0, 10, 100, 1,000, 10,000 and 30,000 ppm) to soil containing filter disk packets of microsclerotia of <em>Mp</em> at day 0 and 14. Filter disk packets were retrieved three days after the drench and microsclerotia were observed microscopically for germination. Results showed that the number of germinating microsclerotia was significantly higher after the application of the germination stimulant compared to non-drench and 0 ppm controls (p < 0.001).</p> <p>An integrated container trial was also conducted using the germination stimulant at 10,000 ppm applied three days prior to a fungicide drench with tebuconazole or thiophanate-methyl to determine the effect of fungicides on the germinated microscleotia. The use of the germination stimulant with label rates of the fungicides lowered the number of germinated intact microsclerotia significantly (p < 0.001) especially after two drench applications. The use of the germination stimulant with fungicides could be investigated further as one method for controlling soilborne diseases of strawberry.</p>","abstract_html":"&lt;p&gt;&lt;em&gt;Macrophomina phaseolina &lt;/em&gt;(&lt;em&gt;Mp) &lt;/em&gt;and &lt;em&gt;Fusarium oxysporum&lt;/em&gt; f. sp. &lt;em&gt;fragariae&lt;/em&gt; (&lt;em&gt;Fof&lt;/em&gt;) are emerging soilborne pathogens causing crown rot and Fusarium wilt, respectively, in commercial strawberry production in California. Fungicides representing eight active ingredients from four different mode of action groups (FRAC groups 1, 3, 7 and 12) were evaluated for their efficacy against each pathogen &lt;em&gt;in vitro&lt;/em&gt; and each disease &lt;em&gt;in planta&lt;/em&gt;. Fungicide active ingredients were evaluated for their ability to inhibit mycelial growth of both pathogens &lt;em&gt;in vitro&lt;/em&gt;. Half-strength potato dextrose agar was amended with six different concentrations (0.01, 0.1, 1.0, 5.0, 10, 50 µg a.i./ml) of seven fungicides in FRAC groups 3, 7 and 12. Concentrations that inhibited fungal growth by 75% (EC&lt;sub&gt;75&lt;/sub&gt;) compared to unamended media were determined for two different isolates each of &lt;em&gt;Mp&lt;/em&gt; and &lt;em&gt;Fof&lt;/em&gt; and were used to determine fungicide rates for subsequent &lt;em&gt;in planta&lt;/em&gt; studies. Tebuconazole strongly inhibited the mycelial growth of both pathogens (average EC&lt;sub&gt;75&lt;/sub&gt; for &lt;em&gt;Mp&lt;/em&gt; was 2.4 ppm; average EC&lt;sub&gt;75&lt;/sub&gt; for &lt;em&gt;Fof&lt;/em&gt; was 7.48 ppm), as did metconazole (average EC&lt;sub&gt;75&lt;/sub&gt; for &lt;em&gt;Mp&lt;/em&gt; was2.53 ppm; average EC&lt;sub&gt;75&lt;/sub&gt; for &lt;em&gt;Fof&lt;/em&gt; was 1.28 ppm). Fludioxonil strongly inhibited mycelial growth of &lt;em&gt;Mp&lt;/em&gt;, but had no impact on the growth of &lt;em&gt;Fof&lt;/em&gt;. Penthiopyrad, fluopyram, flutriafol, and flutolanil were less effective at inhibiting fungal growth of either fungus. Greenhouse &lt;em&gt;in planta &lt;/em&gt;studies evaluated twenty-four fungicide treatments (eight fungicides at low, med and high rates) that were drench applied to infested potting media two days prior to planting of pathogen susceptible strawberry cultivars (San Andreas for &lt;em&gt;Mp&lt;/em&gt; and Monterey for &lt;em&gt;Fof&lt;/em&gt;) and again at day 21. Controls were a non-inoculated and an inoculated water-drench treatment. Buried inoculum was recovered at days 2 and 23 and plated on selective media for colony forming unit (CFU) quantification. Plant disease assessments were made each week for 11 weeks. An analysis of variance (ANOVA) of CFUs revealed no significant differences (p &gt; 0.05) among treatments and when compared to the non-treated control for both &lt;em&gt;Mp&lt;/em&gt; and &lt;em&gt;Fof&lt;/em&gt;, but showed significant decreases (p &lt; 0.05) in CFUs between weeks 1 and 3 for both &lt;em&gt;Mp&lt;/em&gt; and &lt;em&gt;Fof&lt;/em&gt;. An ANOVA for disease assessments in the form of area under the disease progress curve (AUDPC) showed significant decreases of disease severity in treatments with penthiopyrad only (low, medium and high rates) (p &lt; 0.05). There were no significant differences (p &gt; 0.05) in AUDPC among treatments and when compared to the non-inoculated and no-fungicide controls for &lt;em&gt;Fof&lt;/em&gt;. The data indicates that these fungicides used alone are not effective against these pathogens &lt;em&gt;in planta&lt;/em&gt;.&lt;/p&gt; &lt;p&gt;A strawberry plant extract (germination stimulant) was assessed for its ability to stimulate germination of &lt;em&gt;Mp&lt;/em&gt; microsclerotia &lt;em&gt;in vitro&lt;/em&gt; and &lt;em&gt;in planta&lt;/em&gt;. The germination stimulant was applied as a drench at six different concentrations (0, 10, 100, 1,000, 10,000 and 30,000 ppm) to soil containing filter disk packets of microsclerotia of &lt;em&gt;Mp&lt;/em&gt; at day 0 and 14. Filter disk packets were retrieved three days after the drench and microsclerotia were observed microscopically for germination. Results showed that the number of germinating microsclerotia was significantly higher after the application of the germination stimulant compared to non-drench and 0 ppm controls (p &lt; 0.001).&lt;/p&gt; &lt;p&gt;An integrated container trial was also conducted using the germination stimulant at 10,000 ppm applied three days prior to a fungicide drench with tebuconazole or thiophanate-methyl to determine the effect of fungicides on the germinated microscleotia. The use of the germination stimulant with label rates of the fungicides lowered the number of germinated intact microsclerotia significantly (p &lt; 0.001) especially after two drench applications. The use of the germination stimulant with fungicides could be investigated further as one method for controlling soilborne diseases of strawberry.&lt;/p&gt;","abstract_has_math":false,"creators":["Carter, Mel"],"institution":null,"degree_name":"MS in Agriculture - Plant Protection Science","degree_level":null,"degree_discipline":"Horticulture and Crop Science","degree_department":null,"school":null,"contributors":["Kelly Ivors"],"advisors":[],"committee_chairs":[],"committee_members":[],"year":2016,"date_issued":"2016-06-01T07:00:00Z","date_published":"2016-06-01T07:00:00Z","updated_at":"2026-07-24T01:32:50Z","subjects":["disease management","germination stimulant","methyl bromide alternative","soilborne pathogen","strawberry","Fruit Science","Life Sciences","Plant Pathology","Plant Sciences"],"languages":[],"rights":[],"rights_urls":[],"identifier_entries":[{"key":"dc:identifier","label":"Identifier","values":["10.15368/theses.2016.95"],"render_values":[{"text":"10.15368/theses.2016.95","href":"https://doi.org/10.15368/theses.2016.95","code":true}]}]},"links":{"outbound_url":"https://digitalcommons.calpoly.edu/theses/1628","outbound_label":"Repository record","outbound_source":"dc:identifier"},"metadata_groups":[{"id":"people","label":"People","entries":[{"key":"dc:contributor","label":"Contributor","values":["Kelly Ivors"]},{"key":"dc:creator","label":"Author","values":["Carter, Mel"]}]},{"id":"academic_context","label":"Academic Context","entries":[{"key":"dc:date.available","label":"Dc Date Available","values":["2017-06-09T07:00:00Z"]},{"key":"thesis:degree_discipline","label":"Discipline","values":["Horticulture and Crop Science"]},{"key":"thesis:degree_name","label":"Degree Name","values":["MS in Agriculture - Plant Protection Science"]}]},{"id":"subjects_keywords","label":"Subjects and Keywords","entries":[{"key":"dc:subject","label":"Dc Subject","values":["disease management","germination stimulant","methyl bromide alternative","soilborne pathogen","strawberry","Fruit Science","Life Sciences","Plant Pathology","Plant Sciences"]}]},{"id":"identifiers","label":"Identifiers","entries":[{"key":"dc:identifier","label":"Identifier","values":["https://digitalcommons.calpoly.edu/theses/1628","10.15368/theses.2016.95"]}]},{"id":"additional","label":"Additional Metadata","entries":[{"key":"dc:description.abstract","label":"Abstract","values":["<p><em>Macrophomina phaseolina </em>(<em>Mp) </em>and <em>Fusarium oxysporum</em> f. sp. <em>fragariae</em> (<em>Fof</em>) are emerging soilborne pathogens causing crown rot and Fusarium wilt, respectively, in commercial strawberry production in California. Fungicides representing eight active ingredients from four different mode of action groups (FRAC groups 1, 3, 7 and 12) were evaluated for their efficacy against each pathogen <em>in vitro</em> and each disease <em>in planta</em>. Fungicide active ingredients were evaluated for their ability to inhibit mycelial growth of both pathogens <em>in vitro</em>. Half-strength potato dextrose agar was amended with six different concentrations (0.01, 0.1, 1.0, 5.0, 10, 50 µg a.i./ml) of seven fungicides in FRAC groups 3, 7 and 12. Concentrations that inhibited fungal growth by 75% (EC<sub>75</sub>) compared to unamended media were determined for two different isolates each of <em>Mp</em> and <em>Fof</em> and were used to determine fungicide rates for subsequent <em>in planta</em> studies. Tebuconazole strongly inhibited the mycelial growth of both pathogens (average EC<sub>75</sub> for <em>Mp</em> was 2.4 ppm; average EC<sub>75</sub> for <em>Fof</em> was 7.48 ppm), as did metconazole (average EC<sub>75</sub> for <em>Mp</em> was2.53 ppm; average EC<sub>75</sub> for <em>Fof</em> was 1.28 ppm). Fludioxonil strongly inhibited mycelial growth of <em>Mp</em>, but had no impact on the growth of <em>Fof</em>. Penthiopyrad, fluopyram, flutriafol, and flutolanil were less effective at inhibiting fungal growth of either fungus. Greenhouse <em>in planta </em>studies evaluated twenty-four fungicide treatments (eight fungicides at low, med and high rates) that were drench applied to infested potting media two days prior to planting of pathogen susceptible strawberry cultivars (San Andreas for <em>Mp</em> and Monterey for <em>Fof</em>) and again at day 21. Controls were a non-inoculated and an inoculated water-drench treatment. Buried inoculum was recovered at days 2 and 23 and plated on selective media for colony forming unit (CFU) quantification. Plant disease assessments were made each week for 11 weeks. An analysis of variance (ANOVA) of CFUs revealed no significant differences (p > 0.05) among treatments and when compared to the non-treated control for both <em>Mp</em> and <em>Fof</em>, but showed significant decreases (p < 0.05) in CFUs between weeks 1 and 3 for both <em>Mp</em> and <em>Fof</em>. An ANOVA for disease assessments in the form of area under the disease progress curve (AUDPC) showed significant decreases of disease severity in treatments with penthiopyrad only (low, medium and high rates) (p < 0.05). There were no significant differences (p > 0.05) in AUDPC among treatments and when compared to the non-inoculated and no-fungicide controls for <em>Fof</em>. The data indicates that these fungicides used alone are not effective against these pathogens <em>in planta</em>.</p> <p>A strawberry plant extract (germination stimulant) was assessed for its ability to stimulate germination of <em>Mp</em> microsclerotia <em>in vitro</em> and <em>in planta</em>. The germination stimulant was applied as a drench at six different concentrations (0, 10, 100, 1,000, 10,000 and 30,000 ppm) to soil containing filter disk packets of microsclerotia of <em>Mp</em> at day 0 and 14. Filter disk packets were retrieved three days after the drench and microsclerotia were observed microscopically for germination. Results showed that the number of germinating microsclerotia was significantly higher after the application of the germination stimulant compared to non-drench and 0 ppm controls (p < 0.001).</p> <p>An integrated container trial was also conducted using the germination stimulant at 10,000 ppm applied three days prior to a fungicide drench with tebuconazole or thiophanate-methyl to determine the effect of fungicides on the germinated microscleotia. The use of the germination stimulant with label rates of the fungicides lowered the number of germinated intact microsclerotia significantly (p < 0.001) especially after two drench applications. The use of the germination stimulant with fungicides could be investigated further as one method for controlling soilborne diseases of strawberry.</p>"]},{"key":"dc:title","label":"Title","values":["Investigating Novel Approaches for the Integrated Control of the Soilborne Strawberry Pathogens Macrophomina phaseolina and Fusarium oxysporum f. sp. fragariae"]}]}],"canonical_facts":{"dc:contributor":["Kelly Ivors"],"dc:creator":["Carter, Mel"],"dc:date.available":["2017-06-09T07:00:00Z"],"dc:description.abstract":["<p><em>Macrophomina phaseolina </em>(<em>Mp) </em>and <em>Fusarium oxysporum</em> f. sp. <em>fragariae</em> (<em>Fof</em>) are emerging soilborne pathogens causing crown rot and Fusarium wilt, respectively, in commercial strawberry production in California. Fungicides representing eight active ingredients from four different mode of action groups (FRAC groups 1, 3, 7 and 12) were evaluated for their efficacy against each pathogen <em>in vitro</em> and each disease <em>in planta</em>. Fungicide active ingredients were evaluated for their ability to inhibit mycelial growth of both pathogens <em>in vitro</em>. Half-strength potato dextrose agar was amended with six different concentrations (0.01, 0.1, 1.0, 5.0, 10, 50 µg a.i./ml) of seven fungicides in FRAC groups 3, 7 and 12. Concentrations that inhibited fungal growth by 75% (EC<sub>75</sub>) compared to unamended media were determined for two different isolates each of <em>Mp</em> and <em>Fof</em> and were used to determine fungicide rates for subsequent <em>in planta</em> studies. Tebuconazole strongly inhibited the mycelial growth of both pathogens (average EC<sub>75</sub> for <em>Mp</em> was 2.4 ppm; average EC<sub>75</sub> for <em>Fof</em> was 7.48 ppm), as did metconazole (average EC<sub>75</sub> for <em>Mp</em> was2.53 ppm; average EC<sub>75</sub> for <em>Fof</em> was 1.28 ppm). Fludioxonil strongly inhibited mycelial growth of <em>Mp</em>, but had no impact on the growth of <em>Fof</em>. Penthiopyrad, fluopyram, flutriafol, and flutolanil were less effective at inhibiting fungal growth of either fungus. Greenhouse <em>in planta </em>studies evaluated twenty-four fungicide treatments (eight fungicides at low, med and high rates) that were drench applied to infested potting media two days prior to planting of pathogen susceptible strawberry cultivars (San Andreas for <em>Mp</em> and Monterey for <em>Fof</em>) and again at day 21. Controls were a non-inoculated and an inoculated water-drench treatment. Buried inoculum was recovered at days 2 and 23 and plated on selective media for colony forming unit (CFU) quantification. Plant disease assessments were made each week for 11 weeks. An analysis of variance (ANOVA) of CFUs revealed no significant differences (p > 0.05) among treatments and when compared to the non-treated control for both <em>Mp</em> and <em>Fof</em>, but showed significant decreases (p < 0.05) in CFUs between weeks 1 and 3 for both <em>Mp</em> and <em>Fof</em>. An ANOVA for disease assessments in the form of area under the disease progress curve (AUDPC) showed significant decreases of disease severity in treatments with penthiopyrad only (low, medium and high rates) (p < 0.05). There were no significant differences (p > 0.05) in AUDPC among treatments and when compared to the non-inoculated and no-fungicide controls for <em>Fof</em>. The data indicates that these fungicides used alone are not effective against these pathogens <em>in planta</em>.</p> <p>A strawberry plant extract (germination stimulant) was assessed for its ability to stimulate germination of <em>Mp</em> microsclerotia <em>in vitro</em> and <em>in planta</em>. The germination stimulant was applied as a drench at six different concentrations (0, 10, 100, 1,000, 10,000 and 30,000 ppm) to soil containing filter disk packets of microsclerotia of <em>Mp</em> at day 0 and 14. Filter disk packets were retrieved three days after the drench and microsclerotia were observed microscopically for germination. Results showed that the number of germinating microsclerotia was significantly higher after the application of the germination stimulant compared to non-drench and 0 ppm controls (p < 0.001).</p> <p>An integrated container trial was also conducted using the germination stimulant at 10,000 ppm applied three days prior to a fungicide drench with tebuconazole or thiophanate-methyl to determine the effect of fungicides on the germinated microscleotia. The use of the germination stimulant with label rates of the fungicides lowered the number of germinated intact microsclerotia significantly (p < 0.001) especially after two drench applications. The use of the germination stimulant with fungicides could be investigated further as one method for controlling soilborne diseases of strawberry.</p>"],"dc:identifier":["https://digitalcommons.calpoly.edu/theses/1628","10.15368/theses.2016.95"],"dc:subject":["disease management","germination stimulant","methyl bromide alternative","soilborne pathogen","strawberry","Fruit Science","Life Sciences","Plant Pathology","Plant Sciences"],"dc:title":["Investigating Novel Approaches for the Integrated Control of the Soilborne Strawberry Pathogens Macrophomina phaseolina and Fusarium oxysporum f. sp. fragariae"],"thesis:degree_discipline":["Horticulture and Crop Science"],"thesis:degree_name":["MS in Agriculture - Plant Protection Science"]},"updated_at":"2026-07-24T01:32:50Z"}