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Showing 1 to 6 of 6 for “"tau leaping"”.

  1. Adaptive step-size selection for tau-leaping simulation of stochastic particle coalescence

    … and accep- tance criteria for use with the tau leaping method for stochastically simulat- ing the particle coalescence problem. Existing work provides leap selection procedures for pre-leap methods and leap acceptance criteria for post-leap methods. These existing methods have been primarily …

    uiuc Repository record for Adaptive step-size selection for tau-leaping simulation of stochastic particle coalescence (opens in a new tab)

  2. Variance reduction for Poisson and Markov jump processes

    … to the generation of Poisson variates in the tau-leaping time-stepping method for Markov processes. Both antithetical and stratified sampling variance-reduction techniques are considered for Poisson mean estimation, and a hybridization of them is developed that has lower variance than either …

    uiuc Repository record for Variance reduction for Poisson and Markov jump processes (opens in a new tab)

  3. Stochastic modelling of gene regulation with microRNAs

    … in different systems. The Langevin Equation and Tau-Leaping methods (for which Matlab codes are developed here) are shown to be excellent approximations to the Gillespie Algorithm.

    glasgow Repository record for Stochastic modelling of gene regulation with microRNAs (opens in a new tab)

  4. The Art of Modeling and Simulation of Multiscale Biochemical Systems

    … identify species that cause stiffness for the Tau-Leaping method, as well as two stiffness reduction methods. The efficiency is demonstrated by applying this new strategy on a stiff decaying dimerization model and a heat shock protein regulation model.

    vt Repository record for The Art of Modeling and Simulation of Multiscale Biochemical Systems (opens in a new tab)

  5. Variance-reduced simulation of lattice Markov chains

    … to discrete- time simulation (specifically for tau-leaping systems) that leverages insights gained from the continuous-time approach in order to further strengthen the performance of the original algorithm in its weakest regime. This algorithm inherits several desirable properties from the …

    uiuc Repository record for Variance-reduced simulation of lattice Markov chains (opens in a new tab)

  6. Binning for efficient stochastic particle simulations

    Restriction data tranferred 2014-07-01T11:11:50-05:00 Original Data Group with Access UIUC Users [automated] Release Date: 2015-02-03 13:18:53 UTC Reason: Author requested U of Illinois access only (OA after 2yrs) in Vireo ETD system

    uiuc Repository record for Binning for efficient stochastic particle simulations (opens in a new tab)