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Variational Inference Using Approximate Likelihood Under the Coalescent With Recombination

Liu, XinhaoRice University2021

… inference, with the transition rates between local genealogies derived empirically by simulation. This derivation enables VICAR to work directly with three or four taxa and through a divide-and-conquer approach with more taxa. Using a simulated data set resembling a human-chimp-gorilla …

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