Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 6 of 6 for “"draft assembly"”.
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INSIGHTS INTO THE GENETIC DIVERSITY OF ASIMINA TRILOBA: A STUDY USING GENOME ASSEMBLY AND POPULATION GENETICS
… a high-quality reference genome by assembling a draft genome using PacBio's Sequel II long reads and polishing with Illumina short reads. We first used a genotype-by-sequencing (GBS) to genotype 124 individuals from 28 sites across the state of Virginia to produce a set of single nucleotide …
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De novo sequencing, assembly and analysis of the genome and transcriptome of the nematode Panagrolaimus superbus
… prepared from this mixed population. A de novo assembly of the transcriptome was generated using a variety of assembly programs and strategies. A Sanger sequenced expressed sequence dataset comprising 3,982 unigenes was fully annotated and inte- grated into the de novo transcriptome assembly. …
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Development and Production of Affordable Desktop Fiber Extrusion Devices (FrED) for Educational Purposes
… weighs 2.85kg, including the FrED device. The draft assembly manual has been done to pave the way for ramp up.
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Genomic response to selection for behavior
… fox was recently sequenced and assembled, this draft assembly is likely to be affected by errors characteristic of assembly from short next-generation sequencing reads. Here, the refinement of the draft genome, the development of red fox genomic resources, and preliminary behavior genetic …
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Ecology of Root Nodule Bacterial Diversity: Implications for Soybean Growth
… possibly nodule iron. The results include the draft assembly of the proposed Pseudomonas nodulensis sp. nov. as a novel species of nodule adapted bacteria belonging to the P. fluorescens complex. The results of this dissertation contribute to the basic knowledge needed to advance sustainable …
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Metody pro vylepšení genomového sestavení založené na signálovém zpracování
Diplomová práce se zabývá sekvenačními metodami a metodami sestavení genomu s využitím numerických reprezentací. Teoretická část práce popisuje historii objevu DNA, jednotlivé generace sekvenačních metod, samotné metody sestavení genomu a definici numerických reprezentací. Numerické reprezentace …