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Showing 1 to 7 of 7 for “"TASEP"”.
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Totally Asymmetric Simple Exclusion Processes with Finite Resources
… The totally asymmetric simple exclusion process (TASEP) models well the translation process. However, these genes are constantly competing for ribosomes and other resources in the cell. To see how finite resources and competition affects such a system, we must construct a simple model to account …
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Inhomogeneous Totally Asymmetric Simple Exclusion Processes: Simulations, Theory and Application to Protein Synthesis
… a totally asymmetric simple exclusion process (TASEP) with open boundaries. We incorporate the essential components of the translation process: Ribosomes, cognate tRNA concentrations, and mRNA templates correspond to particles (covering ell > 1 sites), hopping rates, and the underlying lattice, …
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The Transition Probability of the Inhomogeneous q-TAZRP
… Prob., vol. 42, no. 6, 2314-2382 (2014)] for q-TASEP model where particles have different jumping rates.
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Control of stochastically interacting systems on networks
… as totally asymmetric simple exclusion process (TASEP), thesis presents routing policies to achieve maximum flow rate of traffic for all set of input traffic conditions. Extensions are also made to TASEP models on intersections and generic road networks.
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Applications of Field Theory to Reaction Diffusion Models and Driven Diffusive Systems
… the totally asymmetric simple exclusion process (TASEP). While its stationary properties are well studied, many of its dynamic features remain unexplored. Here, we focus on the power spectrum of the total particle occupancy in the system. This quantity exhibits unexpected oscillations in the low …
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Controlling non-equilibrium dynamics in lattice gas models
… the (totally) asymmetric exclusion processes (TASEP), and experiences particle blockage in front of the interface to the critical region. This blockage is induced by extended particle clusters, growing logarithmically with system size, in the critical region. We observe the density profiles in …
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Nonlinear Feedback and Stochastic Control in Translation
Proteins are large biological molecules that perform a vast array of functions within living organisms. Proteins are made from a process called translation, in which a ribosome decodes mRNA, a single-stranded copy of DNA, to produce a specific amino acid chain. <br/>Given the essential role of …