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Showing 1 to 2 of 2 for “"Short read alignment"”.

  1. FPGA acceleration of short read alignment with high-level synthesis

    … DNA sequencing is becoming an increasingly widespread process. When performed on human patients, it can allow for the prediction and prevention of diseases. An essential part of this bioinformatics pipeline is short read alignment}, which refers to aligning short fragments of DNA to the large and …

    uiuc Repository record for FPGA acceleration of short read alignment with high-level synthesis (opens in a new tab)

  2. A GPU program to compute SNP-SNP interactions in genome-wide association studies

    … in the next generation sequencing technologies, short read sequences of human genome are made more accessible. Paired end sequencing of short reads is currently the most sensitive method for detecting somatic mutations that arise during tumor development. In this study, a novel approach to …

    njit Repository record for A GPU program to compute SNP-SNP interactions in genome-wide association studies (opens in a new tab)