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Showing 1 to 2 of 2 for “"Sequence Aligner"”.

  1. Efficient parallelization of Bowtie 2 with OpenCL on GPU

    … computation-intensive aspect in bioinformatics, sequence alignment has gained considerable attention from researchers and developers. Among all the sequence aligners, Bowtie 2 is one of the most commonly used, due to its high speed and accuracy. This thesis presents a parallel implementation of …

    uiuc Repository record for Efficient parallelization of Bowtie 2 with OpenCL on GPU (opens in a new tab)

  2. Tiger: tiled iterative genome assembler and approximate multi-genome aligner

    Sequence assembly and alignments are two important stepping stones for comparative genomics. With the fast adoption of the next-generation sequencing (NGS) technologies and the coming of the third-generation sequencing (TGS) technologies, genomics has provided us with an unprecedented opportunity …

    uiuc Repository record for Tiger: tiled iterative genome assembler and approximate multi-genome aligner (opens in a new tab)