Global ETD Search

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Showing 1 to 6 of 6 for “"Seed sequence"”.

  1. Microrna-mediated regulation and the fragile X family of proteins

    … an in vitro capture assay using a P-FMRP peptide sequence bound to agarose beads. These data show that Dicer containing complexes bind FMRP at amino acids 496-503 and that phosphorylation disrupts this association with a consequent increase in association with pre-miRNAs. In sum, we propose that …

    uiuc Repository record for Microrna-mediated regulation and the fragile X family of proteins (opens in a new tab)

  2. Stochastic modeling of biological sequence evolution

    Markov models of sequence evolution are a fundamental building block for making inferences in biological research. This thesis reviews several major techniques developed to estimate parameters of Markov models of sequence evolution and presents a new approach for evaluating and comparing estimation …

    mit Repository record for Stochastic modeling of biological sequence evolution (opens in a new tab)

  3. Genome-Wide Decoding of mRNP and miRNA Maps

    … activity requires base pairing through only 6-8 "seed" nucleotides. By generating crosslinking of native Argonaute (Ago) protein-RNA complexes in mouse brain, Ago HITS-CLIP produced two simultaneous datasets—Ago-miRNA and Ago-mRNA binding sites—that were combined with bioinformatic analysis to …

    rockefeller Repository record for Genome-Wide Decoding of mRNP and miRNA Maps (opens in a new tab)

  4. Exploration of Nuclear Receptor Activity and siRNA-Derived Phenotypes as Therapeutics in Non-Small Cell Lung Cancer

    … phenotypes were largely mediated by miRNA-like seed sequence based effects rather than target-directed siRNA total complementarity silencing. Following this discovery, efforts were undertaken and subsequently completed to identify the "true" targets of these clade-specific siRNAs.

    utswmed Repository record for Exploration of Nuclear Receptor Activity and siRNA-Derived Phenotypes as Therapeutics in Non-Small Cell Lung Cancer (opens in a new tab)

  5. The mechanism and function of pervasive noncoding transcription in the mammalian genome

    … signals, the Ul signal, or 5' splice site sequences recognized by Ul snRNP during splicing, and polyadenylation signal (PAS), differentially mark the two sides of gene transcription start site (TSS), ensuring the generation of full-length mRNA but inducing early termination of uaRNAs. The …

    mit Repository record for The mechanism and function of pervasive noncoding transcription in the mammalian genome (opens in a new tab)