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Showing 1 to 6 of 6 for “"SNP marker"”.

  1. Assessment of a Muscadine Grape (Vitis rotundifolia) Mapping Population for Tolerance to Pierce’s Disease Pathogen Xylella fastidiosa and Resistance to Black Rot Disease Pathogen Guignardia bidwellii

    … based on 80,507 single-nucleotide polymorphism (SNP) markers. Results showed that only 10 genotypes were positive for PD during both seasons, and the average disease severity in the mapping population for black rot ranged from 0.09% to 14.10%. The GWAS analysis, using genotypic data and …

    usm Repository record for Assessment of a Muscadine Grape (Vitis rotundifolia) Mapping Population for Tolerance to Pierce’s Disease Pathogen Xylella fastidiosa and Resistance to Black Rot Disease Pathogen Guignardia bidwellii (opens in a new tab)

  2. Development of tools to study the association of transposons to agronomic traits

    … deep learning models, and 3) develop a tool 'TE-marker' to identify potential TE-regulated alleles associated with agronomic traits. As a result, we propose a series of recommendations and a guideline to develop a comprehensive library to precisely identify TEs in genomes. Secondly, 'DeepTE' …

    vt Repository record for Development of tools to study the association of transposons to agronomic traits (opens in a new tab)

  3. Application of single nucleotide polymorphisms (SNPs) to forensic casework in Malaysia

    … and analysis of single nucleotide polymorphisms (SNPs) have demonstrated the advantage of these markers over short tandem repeats (STRs) in that they only require small amplicons. However, before applying to casework, it is important to develop allele frequency databases from relevant populations. …

    cent-lancashire Repository record for Application of single nucleotide polymorphisms (SNPs) to forensic casework in Malaysia (opens in a new tab)

  4. Genetics and Biochemistry of the Low Tannin Characteristic in Vicia faba L. and Development of a Molecular Marker for the zt2 Gene

    … project was to develop and validate a molecular marker for the zt2 gene. A set of 875 SNP markers physically anchored to the genome of Medicago truncatula was used to genotype a RIL population at the F6 segregating for zt2. One of the SNP markers, located 10.5 cM from zt2, successfully …

    sask Repository record for Genetics and Biochemistry of the Low Tannin Characteristic in Vicia faba L. and Development of a Molecular Marker for the zt2 Gene (opens in a new tab)

  5. The use of Cicer reticulatum L. for genetic improvement of cultivated chickpea

    … and 20 parents using tGBS identified 14,591 SNPs ranging from 634 to 2244 per chromosome. Neighbour-joining cluster analysis based on the SNP data grouped the 401 germplasms into 20 clusters. Admixture analysis revealed 9 groups that had a substantial amount of intermixing. The marker-trait …

    sask Repository record for The use of Cicer reticulatum L. for genetic improvement of cultivated chickpea (opens in a new tab)

  6. The colonisation of canola crops by the diamondback moth, Plutella xylostella L., in southern Australia

    … P. xylostella was investigated using molecular markers and field studies over three years to infer the most likely source populations and the management implications. Results: Although some laboratory hybridisation occurred, deep divergence between the genomes and biology of the two Plutella …

    adelaide Repository record for The colonisation of canola crops by the diamondback moth, Plutella xylostella L., in southern Australia (opens in a new tab)