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Showing 1 to 20 of 644 for “"SNP"”.

  1. A GPU program to compute SNP-SNP interactions in genome-wide association studies

    Ramakrishnan, Srividya

    … effects of the Single Nucleotide Polymorphisms (SNPs) have proven to uncover the underlying complex disease traits. Computing the disease risk based on the interaction effects of SNPs on a case - control study is a difficult problem. As another part of the thesis, a fast GPU program that can …

    njit Repository record

  2. A Computational Approach for SNP Discovery

    Al-Razgan, Othman2014

    gmu

  3. SNP auto-calling using artificial neural networks

    Spivak, Damien

    In recent years feedforward artificial neural networks (ANN) and their training algorithms have become an effective methodology for the construction of nonlinear systems that solve the statistical problem of classification. The ability of ANNs to solve this problem is highly germane to making …

    njit Repository record

  4. SNP Interactions in the Genetic Architecture of Blood Pressure

    Basson, Jacob John2014

    … the current study addresses two: the focus on SNP main effects to the exclusion of interactions, and the low statistical power resulting from the strong multiple-testing burden necessarily imposed when analyzing millions of variants. This study examined the role of interactions among a limited …

    wustl Repository record

  5. Combining SNP and EEG data in a genome-wide association study

    Repky, StefanUniversität Ulm

    ulm-diss Repository record

  6. Use of machine learning techniques for SNP based prediction of ancestry

    Allocco, DominicMassachusetts Institute of Technology2006

    Some have argued that the genetic differences between continentally defined groups are relatively small and unlikely to have biomedical significance. In this study, the extent of variation between continentally defined groups was evaluated. Small numbers of randomly selected single nucleotide …

    mit Repository record

  7. Neišpildytos separatistinės ambicijos bei vidinės (de)stabilizacijos požymiai: SNP partijos atvejo studija /

    Putrius, Faustas,Institutional Repository of Vilnius University2024

    … experienced by the Scottish National Party (SNP). The research employs extreme case study and theory-testing process tracing methods to examine SNP party change over the period of 2014-2023. Utilising an integrated theory of party goals and party change, the nature of the SNP was established …

    vilnius Repository record

  8. Utilizing Haplotypes For Sensitive Snp Array-Based Discovery of Somatic Chromosomal Mutations

    Vattathil, Selina M2014

    <p>Somatic copy-number (CN) gains and losses and copy-neutral loss of heterozygosity (CNLOH) frequently occur in tumors and play a major role in the progression of disease by altering gene dosage and unmasking deleterious recessive variants. Characterizing these mutations in an individual tumor …

    uthsc Repository record

  9. MOL-PCR For SNP Based Detection and Characterization of STEC non-O157 Strains

    Mendez, Heather M.

    … O121, and O145. Single nucleotide polymorphisms (SNPs) have been identified in the O-antigen gene cluster for each of the non-O157 STEC serogroups that can differentiate between a STEC and non-STEC strain. In this study, the multiplex oligonucleotide ligation-PCR (MOL-PCR) detection platform was …

    unm Repository record

  10. Bayesian Hidden Markov Models for finding DNA Copy Number Changes from SNP Genotyping Arrays

    Kowgier, Matthew2012

    … CNVs from single nucleotide polymorphism (SNP) arrays. A Bayesian framework to reconstruct the DNA copy number sequence from the observed sequence of SNP array measurements is proposed. A Markov chain Monte Carlo (MCMC) algorithm, with a forward-backward stochastic algorithm for sampling …

    toronto-retro Repository record

  11. Candidate Gene Expression and SNP Analyses of Toxin-Induced Dilated Cardiomyopathy in the Turkey(Meleagris gallopavo)

    Lin, Kuan-chinVirginia Tech2006

    … these genes for single nucleotide polymorphisms (SNPs) that could be useful in evaluating their functions in the incidence and severity of toxin-induced DCM in turkeys. There were no significant differences between affected and unaffected birds in the expression of both cTnT and PLN. A total of 12 …

    vt Repository record

  12. Exploring the genomics of cognitive impairment: whole-genome SNP genotyping experience in Estonian patients and general population

    Männik, Katrin2012

    tartu

  13. Development of a SNP Assay for the Differentiation of Allelic Variations in the mdx Dystrophic Mouse Model

    Misyak, Sarah A.Virginia Tech2008

    … assay based on single nucleotide polymorphism (SNP) extension technology (i.e., SNaPshot®) would be advantageous because its specificity and capability to be automated would reduce the labor involved and increase the fidelity of each assay. A SNaPshot® assay has been developed that provides a …

    vt Repository record

  14. SNP ANALYSIS FOR DROUGHT-RELATED CANDIDATE GENES IN A GERMPLASM COLLECTION AND A TILLING POPULATION OF ITALIAN RICE

    CASELLA, LAURAUniversità degli Studi di Milano2012

    Rice is the most important food crop in the world, representing the main source of caloric intake for more than one third of the world’s population. Although a great part of the global rice production comes from the developing countries such as China, India, Indonesia and Bangladesh, northern Italy …

    milano Repository record

  15. Taste Intensity Phenotype: Associations with TAS1R1-intronic SNP and Developing a Protocol to Measure this Phenotype in Population-based Studies

    Rawal, Shristi2011

    uconn-diss Repository record

  16. Novel applications of SNP array data in the analysis of the genetic structure of Europeans and in genetic association studies

    Esko, Tõnu2012

    tartu

  17. A Novel SNP Genotyping Technique to Determine Orangutan Relatedness and Genetic Diversity at Camp Leakey in Tanjung Puting, Central Kalimantan

    Linsky, Ruth Ella2024

    … human targeted single nucleotide polymorphism (SNP) microarray technology. I confirmed results of this new genotyping technique through standard microsatellite short tandem repeat (STR) micro-capillary genotyping. I estimate genetic diversity and relatedness (<em>r</em>) for 32 (21 female and 9 …

    central-wash Repository record

  18. Assessment of Chenopodium quinoa Willd. Genetic Diversity in the USDA and CIP-FAO Collections Using SSR?S and SNP?S

    Christensen, Shawn A.2005

    … (SSRs) and single nucleotide polymorphisms (SNPs) to (1) genetically characterize the inherent diversity of 152 accessions of <em>C. quinoa</em>; (2) determine to what degree the CIP-FAO collection represents the range of genetic diversity in quinoa; and (3) test four hypotheses regarding …

    byu Repository record

  19. Identification of a suitable SNP for allele-specific silencing of the disease-causing gene in SCA1 patients in South Africa

    Baine, Fiona KebirungiDivision of Human Genetics2010

    … the existence of founder haplotypes using a SNP-based haplotype. The SNPbased haplotype was constructed using 4 SNPs in individuals from 5 different families of Mixed Ancestry origin from the Western Cape and the two founder events were confirmed. The SNP-based haplotype also shows the …

    cape-town Repository record

  20. L' effet polymorphisme d'un seul nucléotide (SNP) de la PLA2 de groupe IVC (cPLA2y) sur son activité enzymatique

    Gagnon, KristineUniversité de Moncton,2019

    … un polymorphisme d'un seul nucléotide (SNP) causant une mutation qui change le résidu 203 d'une sérine à une proline (rs156631). Cette mutation est peu étudiée et étonnamment n'est jamais mentionné dans les études des propriétés de cette enzyme. Dans cette étude, en utilisant …

    moncton Repository record

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