Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 4 of 4 for “"RiboSeq"”.
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Representing translation: concepts, methods, and resources for protein coding loci representation and ribosome profiling data analysis
… of public Ribo-Seq data, we introduce the RiboSeq Data Portal. This resource makes 14,840 Ribo-Seq samples from 969 studies across 96 different species/strains. This resource serves as a database of standardised metadata for each of these samples and also offers pre-processed data in …
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Ribosome profiling of porcine reproductive and respiratory syndrome virus reveals novel features of viral gene expression
… was characterised using ribosome profiling (RiboSeq), a high-throughput sequencing-based technique that allows the positions of translating ribosomes to be mapped to a genome with sub-codon precision. This was used in parallel with RNA sequencing (RNASeq) to analyse changes in viral gene …
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A multi-level approach of gene expression data analysis to investigate translatome dynamics across multiple tissues, stages, and mouse models of SMA
… Analysis (PCA), pipelines for the analysis of RiboSeq positional information, differential and Gene Ontology enrichment analysis, and network methodologies. This set of tools applies to the study of ribosome profiling data and allows to investigate the translational mechanisms underlying SMA. …
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Translation-Mediated Stress Responses: Mining of Ribosome Profiling Data
Advances in next-generation sequencing platforms during the past decade have resulted in exponential increases in biological data generation. Besides applications in determining the sequences of genomes and other DNA elements, these platforms have allowed the characterization of cell-wide mRNA …