Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
Results
Showing 1 to 6 of 6 for “"RNA Pseudoknot"”.
-
Crystal structure and functional studies of a viral RNA pseudoknot involved in ribosomal frameshifting
Thesis (Ph.D.)--Massachusetts Institute of Technology, Dept. of Chemistry, 1999.
-
Analytic Combinatorics Applied to RNA Structures
… it has been shown that the folding pattern of an RNA molecule plays an important role in its function, likened to a lock and key system. γ-structures are a subset of RNA pseudoknot structures filtered by topological genus that lend themselves nicely to combinatorial analysis. Namely, the …
-
Data mining in computational proteomics and genomics
… The second part of this dissertation focuses on RNA pseudoknot structure matching and alignment. RNA pseudoknot structures play important roles in many genomic processes. Previous methods for comparative pseudoknot analysis mainly focus on simultaneous folding and alignment of RNA sequences. …
-
BIOINFORMATICS INVESTIGATION OF RNA PSEUDOKNOTS
Pseudoknots are a special kind of RNA structures that play functional roles in a wide variety of biological processes. Pseudoknots are best known for their involvement in the −1 programed ribosomal frameshifting (−1 PRF) and stop codon readthrough translational recoding events as the stimulatory …
-
Ribosome profiling of porcine reproductive and respiratory syndrome virus reveals novel features of viral gene expression
… precision. This was used in parallel with RNA sequencing (RNASeq) to analyse changes in viral gene expression over a timecourse of infection in MARC-145 cells. The PRRSV genome contains two programmed ribosomal frameshift (PRF) signals, at which conserved elements promote the backwards …
-
FUNCTIONAL ANALYSIS OF THE UPSTREAM PSEUDOKNOT DOMAIN AND ITS SUBSTITUTION WITH A POLY(A) TRACT IN TOBACCO MOSAIC VIRUS (TMV)
THE UPSTREAM PSEUDOKNOT DOMAIN (UPD) OF TOBACCO MOSAIC VIRUS (TMV) GENOME PLAYS AN IMPORTANT ROLE DURING VIRUS REPLICATION AND TRANSLATION. THE FUNCTIONS OF UPD WERE ANALYZED USING A SUBSTITUTED MUTANT TMV-43A IN WHICH AN INTRODUCED 43 NT POLY(A) TRACT REPLACED THE UPD IN TMV GENOME. TMV-43A …