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Showing 1 to 20 of 56 for “"MLST"”.

  1. Novel Use of Scenarios in the Usability Engineering of a Next-generation MLST Tool

    Alpert, StephanieVirginia Tech2014

    … of a next-generation multilocus sequence typing (MLST) tool. The following three research question were investigated during the usability process: (1) what are the differences in the elicited requirements as scenarios move further from extant work practices, (2) what are the differences in the …

    vt Repository record

  2. Diversity and virulence of the genus Cronobacter revealed by multilocus sequence typing (MLST) and comparative genomic analysis

    Joseph, SMNottingham Trent University2013

    … In this study, a multilocus sequence typing (MLST) approach has been established to span the entire Cronobacter genus, by employing the alleles of 7 housekeeping genes (atpD, fusA, glnS, gltB, gyrB, infB and ppsA, total length 3036 bp). The 325 Cronobacter spp. strains used in the study …

    nott-trent Repository record

  3. Untersuchung möglicher Zusammenhänge zwischen Phänotyp, Zellwandkomposition und Genotyp in dem humanpathogenen Hefepilz Candida glabrata

    Schwarz, Alexander2012

    … aus in der Multilokus-Sequenztypisierung (MLST) isogenen Klonen des Labor-Referenzstamms ATCC2001/CBS138, das andere Kollektiv aus 124 heterogenen klinischen Isolaten, die aus unterschiedlichen europäischen Forschungs- und Diagnostikzentren stammten. Die Charakterisierung beider Gruppen …

    goettingen Repository record

  4. Typing and genome comparison of Neisseria meningitidis by DNA-microarrays

    Swiderek, HalinaUniversität Würzburg

    … adopting the multilocus sequence typing (MLST) concept. The number of oligonucleotides needed to cover all known polymorphisms was much lower compared to the number needed if a tiling strategy would have been chosen. Initial experiments using oligonucleotides 28-32 nucleotides in length, …

    wurz-thes Repository record

  5. Physiological characterisation of the neonatal meningitic bacterium Cronobacter sakazakii

    Sonbol, HSNottingham Trent University2015

    … 7 species. A multiple locus sequence typing (MLST) scheme was designed for Cronobacter and was used to identify over 400 sequence types (STs). Notably, C. sakazakii ST4 and its single/double loci variants, which together form clonal complex 4 (CC4), are predominantly associated with neonatal …

    nott-trent Repository record

  6. To study the fitness of Bacillus thuringiensis to survive in natural and artificial, terrestrial ecosystems

    Prabhakar, AmitUniversity of Greenwich2010

    … first report of the Multi Locus sequence typing (MLST) of the B. thuringiensis strains isolated from the phylloplane of the clover leaf. A clonal population structure was indicated, although greater variation in sequence types (STs) was discovered in previous collections of B. cereus/B. …

    greenwich

  7. Determining role of bacteria associated with bacterial spot on pumpkin and squash fruit in the North Central Region of the United States

    Liu, QiongUniversity of Illinois at Urbana-Champaign2015

    … a greenhouse. Both multilocus sequence typing (MLST) and restriction associated DNA sequence analysis (RADseq) were used to study genetic variation among X. cucurbitae isolates. Twenty X. cucurbitae isolates from Illinois, Indiana, Kansas, Ohio, and Wisconsin were subjected to MLST analysis with …

    uiuc Repository record

  8. Herstellung eines monoklonalen Antikörpers gegen die Endonuklease NmeDI zur Typisierung von Neisseria meningitidis

    Weinand, HanneUniversität Würzburg

    … Anwendung der Multilokus Sequenz Typisierung (MLST) eingesetzt.

    wurz-thes Repository record

  9. The identification and characterization of a clinical isolate of a methicillin susceptible Staphylococcus aureus ST612

    Moleleki, MalefuDivision of Medical Microbiology2012

    … spa typing and multi-locus sequence typing (MLST) identified one isolate, MS14, as ST612-MSSA, spa type t064.

    cape-town Repository record

  10. Techniques for the identification and differentiation of Cronobactor species

    Jackson, EENottingham Trent University2016

    … method of multilocus sequence typing (MLST) was used to identify and characterize a collection of Cronobacter strains and these results were used in a variety of applications. These sequences were used to identify a novel species, characterize outbreak strains, and resolve discrepancies …

    nott-trent Repository record

  11. Streptococcus equi subsp. zooepidemicus in New Zealand horses

    Patty, Olivia AnneThe University of Waikato2020

    … szp or standard multilocus sequence typing (MLST). Both typing schemes were shown to lack the discriminatory power needed to completely separate the isolates which was resolved by employing core genome MLST. Importantly, none of these typing methods could link a particular strain to disease …

    waikato-masters Repository record

  12. Characterisation of the Virulence and Determinants of Virulence of <i>C. Neoformans</i> var.<i>grubii</i> Genotypes from HIV Infected and Uninfected Patients in Vietnam

    Lam Thanh TuanThe Open University2018

    … and HIV-uninfected patients. <br></br><br></br> MLST-based interrogation of population structure of clinical <i>C. neoformans</i> var. <i>grubii</i> isolates from Vietnam and Laos reveal that the population from Vietnam is unique and intermediate in composition between that from Thailand/Laos to …

    the-open-u Repository record

  13. A genome wide approach to identify factors asociated with vancomycin non-susceptibility in Staphylococus aureus

    Shurko, James Frederick2019

    … factors such as multi locus sequence types (MLSTs) or single nucleotide polymorphisms (SNPs) that may aid in identifying or predicting the presence of hVISA. This study therefore utilized a stepwise phenotypic approach to elucidate the prevalence of hVISA among a collection of clinical …

    tdl Repository record

  14. Pandemic <em>Vibrio parahaemolyticus</em>: Defining Strains Using Molecular Typing and a Growth Advantage at Lower Temperatures

    Davis, Carisa ReneeDigital Commons @ University of South Florida2008

    … specific PCR and multilocus sequence typing (MLST), were compared to determine the best method for pandemic strain determination. MLST was the best method because it was the most informative and accurate. Furthermore, nine Florida outbreak strains were identified as pandemic. Using …

    usf Repository record

  15. A genome wide approach to identify factors asociated with vancomycin non-susceptibility in Staphylococus aureus

    Shurko, James FrederickThe University of Texas at Austin2019

    … factors such as multi locus sequence types (MLSTs) or single nucleotide polymorphisms (SNPs) that may aid in identifying or predicting the presence of hVISA. This study therefore utilized a stepwise phenotypic approach to elucidate the prevalence of hVISA among a collection of clinical …

    texas Repository record

  16. Genomic diversity of Lactobacillus salivarius

    Raftis, Emma J.University College Cork2015

    … (CGH) and multilocus sequence typing (MLST) were employed to assess the level of genomic diversity in L. salivarius. The wellcharacterised probiotic strains L. salivarius UCC118 was employed as a genetic reference strain. The group of test strains were chosen to reflect the range of …

    cork Repository record

  17. Nitrogen metabolism and butanol production by South African clostridium beijerinckii and clostridium saccharobutylicum strains

    Reeve, Byron William PatrickDepartment of Molecular and Cell Biology2014

    … groups respectively. Multilocus Sequence Typing (MLST) was developed for a smaller selection of strains and showed a further two strain groups within the NCP C. beijerinckii strains and three groups within the C. saccharobutylicum strains.

    cape-town Repository record

  18. Genetische Diversität der humanen kommensalen Bakterienart Neisseria lactamica in epidemiologisch verknüpften Gruppen

    Oberkötter, MarcUniversität Würzburg

    … wurden einer Multi-Lokus-Sequenztypisierung (MLST) zur Untersuchung ihrer genetischen Diversität unterzogen. Dabei wurden sowohl Sequenzen der 3 Stoffwechselgene argF, recA und rho, als auch Sequenzen des 16S rRNA-Gens analysiert. Für das 16S rRNA-Gen fanden sich zehn, für argF fünf, für recA …

    wurz-thes Repository record

  19. Genome sequence of the hyperinvasive Campylobacter jejuni strains

    Baig, ANottingham Trent University2012

    … group and these strains possessed different MLST profiles.

    nott-trent Repository record

  20. Niche-adaptive evolution in Campylobacter jejuni

    Morley, LNottingham Trent University2014

    … This research reveals new information on the MLST ST403 Clonal Complex, a previously identified C. jejuni lineage associated with the porcine host. ST403CC C. jejuni have also been linked with other mammalian hosts to a lesser degree, and have been implicated in human campylobacteriosis, …

    nott-trent Repository record

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