Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 3 of 3 for “"GWIPS-viz"”.
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Interrogating annotated protein coding regions for hitherto undetected translation
… then can be visualised and analysed in Trips-viz and GWIPS-viz - transcriptomic and genomic browsers for ribosome profiling data which altogether comprise the Riboseq.org resource. This platform enables preparing ribosome profiling data for subsequent detection of translated ORFs in Trips-viz. …
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Visualising ribosome profiling and using it for reading frame detection and exploration of eukaryotic translation initiation
… genomewide information on protein synthesis (GWIPS) in vivo. The high resolution of ribo-seq is one of the exciting properties of this technique. In Chapter 2, I present a computational method that utilises the sub-codon precision and triplet periodicity of ribosome profiling data to detect …
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Development of a ribosome profiling protocol to study translation in the yeast Kluyveromyces marxianus
… transcriptome to a publicly available genome (GWIPS-viz) and transcriptome browser (Trips-Viz) which are tailored specifically for ribosome profiling data. Together, these protocols and browsers will allow others in the K. marxianus community to generate ribosome profiling data and …