Global ETD Search
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Showing 1 to 7 of 7 for “"Distance geometry"”.
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Geometric Build-up Solutions for Protein Determination via Distance Geometry
… modeling is referred to as the Molecular Distance Geometry Problem (MDGP). This problem seeks to find coordinates for the atoms of a protein or molecule when given only a set of pair-wise distances between atoms. To introduce the complexities of the MDGP we begin at its origins in distance …
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The effects of different degrees of confinement on the deformation of square plates subjected to blast loading
… on several factors; for instance stand off distance, geometry and mass of explosive, geometry of the structure, medium (air, water, soil) and degree of confinement. Depending on the location of the explosion relative to the surrounding structures different degrees of confinement are …
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Structure and function relationship of cytochrome c studied by NMR and molecular dynamics simulations
… $\sp1$H-NMR techniques and hybridized distance geometry-simulated annealing calculations. A family of 44 individually refined structures was obtained for each redox state. The all-residue r.m.s.d. about the average structure for ferrocytochrome c is 0.35 $\pm$ 0.04 A for the backbone N, …
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Conformational analysis of antibody binding site using EDMA methods /
Euclidean distance matrix analysis (EDMA) methods are used to distinguish whether or not significant difference exists between conformational samples of antibody complementarity determining region (CDR) loops, isolated LI loop and LI in three-loop assembly (LI, L3 and H3) obtained from Monte Carlo …
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A Geometric Approach for Generating Feasible Configurations of Robotic Manipulators
… to outperform. However, this results in a geometry of motion or kinematics that makes all aspects of robotic manipulation challenging from a computational perspective. A major part of this challenge lies in the fact that computing joint configurations adhering to a specific set of …
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On Non-rigid Linkages
… be re-expressed entirely in terms of inter-nodal distances. This yields potential non-rigid deformation paths without introducing additional degrees of freedom. Extending the analysis to Baranov trusses and Assur groups, we adapt bilateration methods from distance geometry to map how structural …
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Computational imaging and automated identification for aqueous environments
… ocean requires tools capable of observing from a distance while retaining detail necessary for biology and ecology, ideal for optical methods. Algorithms that work with existing SeaBED AUV imagery are developed, including habitat classi fication with bag-of-words models and multi-stage boosting …