Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 9 of 9 for “"Differential Abundance Analysis"”.
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The mucosal microbiome of inflammatory bowel diseases
… controls that is associated with inflammation. Differential abundance analysis reveals a total of 89 taxa in this cohort to be different between CD and UC when compared to healthy controls. Clustering of these samples reveals discrete groups which may provide a frame-work for sub-typing IBD …
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Host Immune-Microbial Interactions in Inflammatory States
… healthy control subjects. However, RNA-seq and differential gene expression analysis of the immune transcriptome revealed that the innate immune response in HD, while intact, was delayed compared to controls. Network analysis of differential gene module co-expression and transcription …
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UNDERSTANDING DIFFERENTIAL ABUNDANCE IN MICROBIAL ECOLOGY USING COMMUNITY STRUCTURE.
… food science, agriculture, and medicine. Differential abundance analysis (DAA) is one of the central statistical methods for identifying microbial features that are associated with macroscopic states. Differentially abundant microbial features can broaden the understanding of disease …
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Microbiome Dynamics in Broilers Infected with Infectious Bronchitis Virus and the Protective Role of Lactobacillus-Based Probiotics
… probiotics only group at 15 dpi. Beta diversity analysis indicated IBV challenged only and both the probiotic supplemented groups in advance to viral challenge developed a distinct microbial composition following infection. According to differential abundance analysis, IBV infection favored the …
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Star Cluster Formation and Galactic Assembly: from instrumentation, to observations and simulations
… evolution of GCs by performing a high precision, differential abundance analysis of 15 red giant stars in the potential cluster siblings, NGC 288 and 362. Both clusters show sta- tistically significant dispersion in both iron and heavy elements, seemingly at odds with the current classifications …
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Star Cluster Formation and Galactic Assembly: from instrumentation, to observations and simulations
… evolution of GCs by performing a high precision, differential abundance analysis of 15 red giant stars in the potential cluster siblings, NGC 288 and 362. Both clusters show sta- tistically significant dispersion in both iron and heavy elements, seemingly at odds with the current classifications …
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Profiling Bacterial Community Dynamics For Wildlife Ecology and Geological Mineral Exploration
… kimberlitic and background soils; however, differential abundance analysis identified eight amplicon sequence variants (ASVs) with kimberlitic bioindicator potential. Two unclassified ASVs from the Bacteroidota family env.OPS 17 were highly specific to kimberlitic soils, and conversely three …
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Single-cell Protein-Transcriptome Atlas of Haematopoiesis across the Human Lifespan
… cellular states and do not enable tissue scale analysis. We take advantage of the method Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-seq), which enables the simultaneous combination of highly multiplexed cell surface protein marker detection with unbiased transcriptome …
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Microbiome associated with Ulva lacinulata and seawater in an integrated abalone (Haliotis midae)–Ulva system with partial recirculation
… techniques were used to assess changes in the abundance of specific bacteria on Ulva and in seawater using three selective media types, namely tryptic soy agar (TSA; a general media routinely used for isolation of marine bacteria), thiosulfate-citrate-bile-sucrose (TCBS) agar (Vibrio …