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Showing 1 to 2 of 2 for “"Chemical Langevin Equation"”.
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Model order reduction for stochastic models of biomolecular systems with time-scale separation
… consider biomolecular systems modeled using the chemical Langevin equation (CLE) and the Linear Noise Approximation (LNA). Specifically, we consider biomolecular systems with linear propensity functions modeled by the CLE and systems with arbitrary propensity functions modeled by the LNA. For …
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How bacteria tune mixed positive/negative feedback loops to generate diverse gene expression dynamics
… we present the Catalyst.jl tool for modelling chemical reaction networks. It is a useful systems biology tool that we will use to implement models of one general, and two specific (σV and σB , both in Bacillus subtilis), sigma factor circuits. Our σV model demonstrates how this circuit’s …