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Showing 1 to 7 of 7 for “"CAZyme"”.

  1. Design characterisation and in planta expression of a chimeric xylanase

    … processes. Carbohydrate Active enZymes (CAZymes) may reduce recalcitrance, through heterologous expression directly in the lignocellulosic biomass. CAZymes from extremely thermophilic organisms are not normally active at the mesophilic temperatures, allowing for accumulation in the …

    pretoria Repository record for Design characterisation and in planta expression of a chimeric xylanase (opens in a new tab)

  2. Community Composition and Function of the Hindgut Microbiome in Seaweed-Eating Marine Fish

    … endo-acting carbohydrate-active enzymes (CAZymes) associated with both classes suggest their involvement in initiating glycan depolymerization. Bacteroidia contributed the most to CAZyme-related gene expression in the hindgut, particularly in the biomass-rich hindgut chamber. The …

    auckland-ms Repository record for Community Composition and Function of the Hindgut Microbiome in Seaweed-Eating Marine Fish (opens in a new tab)

  3. Genomic Evolution in the Oomycetes

    … protein level. Comparative genomic analysis of CAZymes suggest that oomycete lifestyles may be linked to their CAZyme repertoires. Overall, the data presented in this thesis expands our knowledge of oomycete genome evolution.

    maynooth Repository record for Genomic Evolution in the Oomycetes (opens in a new tab)

  4. Unravelling the role of Bacteroides and Phocaeicola in the human gut: exploring evolutionary dynamics, mother-to-infant vertical transmission, and functional characteristics

    … differences, like Carbohydrate-Active enZymes (CAZyme) content, antimicrobial resistance profile and mobile genetic elements. Both species have an open pan-genome and a similar antimicrobial resistance profile, but different CAZyme content, indicating they might have evolved to occupy different …

    cork Repository record for Unravelling the role of Bacteroides and Phocaeicola in the human gut: exploring evolutionary dynamics, mother-to-infant vertical transmission, and functional characteristics (opens in a new tab)

  5. Harnessing Deep Learning with Protein Language Models to Unveil Microbial Enzyme Function in Health and Disease

    … the annotation of Carbohydrate Active Enzymes (CAZymes) in metagenomic datasets. I applied CAZyLingua to a paired mother/infant longitudinal dataset and revealed unannotated CAZymes linked to microbiome development during infancy. When applied to metagenomic datasets derived from patients …

    cambridge Repository record for Harnessing Deep Learning with Protein Language Models to Unveil Microbial Enzyme Function in Health and Disease (opens in a new tab)

  6. Comparative whole genome transcriptional responses of Ruminococcus albus strain 7 and 8: a case for specialization and niche differentiation

    … the hydrolysis of AHPCS than R. albus 7. More CAZyme genes of R. albus 8 responded to WAX than PASC, while those genes of R. albus 7 responded to more PASC than WAX. When hemicellulose in AHPCS started to decrease in the culture, R. albus 8 down-regulated the expression of genes for sugar …

    uiuc Repository record for Comparative whole genome transcriptional responses of Ruminococcus albus strain 7 and 8: a case for specialization and niche differentiation (opens in a new tab)

  7. Characterization and rational design of biomolecular sensors using molecular dynamics simulations

    lethbridge