Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 5 of 5 for “"Biochemical Reaction Networks"”.
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Fast simulation of stochastic biochemical reaction networks on cytomorphic chips
The large-scale simulation of biochemical reaction networks in cells is important in pathway discovery in medicine, in analyzing complex cell function in systems biology, and in the design of synthetic biological circuits in living cells. However, cells can undergo many trillions of reactions over …
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Synthetic analog feedback control circuits in living cells
Models of biochemical reaction networks in cells are important for advancing our understanding of complex biological systems and for designing functional synthetic biological circuits. However, most models are based on a deterministic digital framework that is largely incompatible with nonlinear …
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Identifying and modeling perturbed networks in cancer through statistical and constraint-based analysis
… work has focused largely on modeling biological networks—using both statistical and mechanistic modeling approaches—with applications to medicine, energy, and genomic science. The more coarse-grained of these approaches use statistical analysis of high-throughput expression data to identify …
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Collective analog bioelectronic computation
… between the equations that describe chemical-reaction dynamics and the equations that describe subthreshold current flow in transistors to create fast-and-highly-parallel integrated-circuit models of protein-protein and gene-protein networks inside a cell. Due to a natural mapping between the …
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How bacteria tune mixed positive/negative feedback loops to generate diverse gene expression dynamics
… the Catalyst.jl tool for modelling chemical reaction networks. It is a useful systems biology tool that we will use to implement models of one general, and two specific (σV and σB , both in Bacillus subtilis), sigma factor circuits. Our σV model demonstrates how this circuit’s bistability …