Global ETD Search
Search theses and dissertations gathered from participating repositories worldwide. Every result links back to the library that holds it. No account is needed.
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Showing 1 to 6 of 6 for “"Bacterial genomics"”.
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Examination of the nematostella vectensis holobiont by comparative bacterial genomics and metatranscriptomics
… genomic analysis of ten newly sequenced bacterial isolates from four bacterial populations (Pseudomonas oleovorans, Agrobacterium tumefaciens, Limnobacter thiooxidans and Stappia stellulata) that are associated with Nematostella in the laboratory and/or its natural salt marsh habitat was …
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The Molecular Epidemiology of Enteric Fever in South and Southeast Asia
… trial to investigate the impact of AMR and bacterial genotype on the disease outcome. A novel subclade of ciprofloxacin-resistant H58 <i>S.</i> Typhi associated with increased treatment failure was identified and these organisms were likely widespread in Indian subcontinent. Subsequently, …
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Examining bacterial variation with genome graphs and Nanopore sequencing
A bacterial species' genetic content can be remarkably fluid. The collection of genes found within a given species is called the pan-genome and is generally much larger than the gene repertoire of a single cell. A consequence of this pan-genome is that bacterial genomes are highly adaptable and …
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Evolutionary Genomics of Cystic Fibrosis and Nosocomial Pathogens of the Mycobacterium abscessus species complex
The $\textit{Mycobacterium abscessus}$ species complex (MABSC) consists of three subspecies, $\textit{M. a. abscessus}$, $\textit{M. a. massiliense}$ and $\textit{M. a. bolletii}$. All three of these subspecies are capable of causing opportunistic pulmonary and skin and soft tissue infections in …
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A gene-space de Bruijn graph framework for improved genotyping of antimicrobial resistance genes
… in vitro and in vivo conditions. As a result, genomics has become an important approach, enabling the detection of AMR-associated genes and single nucleotide polymorphisms. This typically involves assembling sequencing reads and annotating the assemblies for known AMR determinants. Long-read …
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Bacteria Big and Small: Exploring the Gut Microbiota of Marine Herbivorous Fish and Student Learning About Cell Size
… and genome content. The gene content of 106 bacterial isolates differs significantly by isolation source supported by non-metric multidimensional scaling (NMDS) analyses. In addition to environmental conditions, bacterial metabolic processes may be impacted by cell size. Because bacteria are …