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Showing 1 to 8 of 8 for “"3D genome organization"”.

  1. How Chromosome-Nuclear Envelope Attachments Affect 3D Genome Organization

    … for gene expression and regulation. Thus, genome sequences must be understood in the context of their 3D organization which critically influences the flow of information. The effort to understand this added complexity now encompasses an entire field of chromosome biology and is reshaping …

    vt Repository record for How Chromosome-Nuclear Envelope Attachments Affect 3D Genome Organization (opens in a new tab)

  2. Analysis of 3D Genome Organization in 4-Cell Mouse Embryos

    … has shown a tight coupling between the spatial organization of the genome inside the cell nucleus and a cell’s gene expression profile, in order to gain insights into cell fate determination, we studied the 3D genome organization; in particular how chromosomes are arranged in the 3D space of the …

    mit Repository record for Analysis of 3D Genome Organization in 4-Cell Mouse Embryos (opens in a new tab)

  3. Computational methods for analyzing and modeling gene regulation and 3D genome organization

    … analyzing and linking gene expression with the 3D organization of the genome. First, I describe methodologies for elucidating gene regulatory mechanisms by considering multiple data modalities. I design a computational framework for identifying colocalized and coregulated chromosome regions by …

    mit Repository record for Computational methods for analyzing and modeling gene regulation and 3D genome organization (opens in a new tab)

  4. The role of MLL4 in the chromatin framework: from the epigenome to 3D genome organization

    … haploinsufficiency, TrxG members show reduced genome binding, while PcG strengthens its enrichment and genome occupancy. This chromatin state rearrangement is also reflected on a three-dimensional scale. Genome Architecture Mapping (GAM) experiments reveal distinct changes in 3D chromatin …

    trento Repository record for The role of MLL4 in the chromatin framework: from the epigenome to 3D genome organization (opens in a new tab)

  5. Dissecting The Roles of Human Smc Complexes In Transcription Regulation and Chromatin Organization

    … elements and genes in the three-dimensional (3D) genome. However, the hierarchy of chromatin contacts and their underlying mechanisms are not well-understood. SMC complexes including Cohesin complex and Condensin complex has been widely proposed to organize 3D genome structure, and further …

    uthsc Repository record for Dissecting The Roles of Human Smc Complexes In Transcription Regulation and Chromatin Organization (opens in a new tab)

  6. """TSA-Seq"": a novel proximity mapping approach for studying three dimensional genome organization and function"

    "The organization of chromatin and its localization in the eukaryotic cell nucleus plays a critical role in gene regulation (Agarwal and Rao, 1998; Brown, 2003; Ferrai et al., 2010) and is important for maintaining normal genome function. However, although it is known that the distribution of …

    uiuc Repository record for """TSA-Seq"": a novel proximity mapping approach for studying three dimensional genome organization and function" (opens in a new tab)

  7. Molecular Mechanisms Behind Sars-Cov-2 Induced Host Genome Restructuring

    … at least in part, to significant alterations in 3D genome organization and epigenetic landscape following SARS-CoV-2 infection that are distinct from and more severe than changes caused by other viral infections or immune stimulants. While these changes at the chromatin level are important for …

    uthsc Repository record for Molecular Mechanisms Behind Sars-Cov-2 Induced Host Genome Restructuring (opens in a new tab)

  8. New insights into 3D genome architecture through improved genomic methods

    Submission published under a 24 month embargo labeled 'Closed Access', the embargo will last until 2027-05-01

    uiuc Repository record for New insights into 3D genome architecture through improved genomic methods (opens in a new tab)